Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PhnF regulog to Ralstonia eutropha JMP134

Reference regulog properties
Source regulog: PhnF - Ralstonia
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Phosphonate utilization
Effector:
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Ralstonia eutropha JMP134
Orthologous TF(s) Reut_B4185
Regulated genes 2
Built upon 8 sites [see more]
Predicted regulatory interactions in Ralstonia eutropha JMP134
Locus tag Position Score Sequence
Position: -243
Score: 6.7
Sequence: CCTATACGTCTATACGTGTAGA
Locus tag: Reut_B4185
Reut_B4185 -243 6.7 CCTATACGTCTATACGTGTAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: phnF
Ortholog function: Transcriptional regulator for phosphonate utilization, GntR family
Ralstonia metallidurans CH34 Rmet_0767 -155 7 CCTATACGTCTATACGTTTAGA
Ralstonia eutropha JMP134 Reut_B4185 -243 6.7 CCTATACGTCTATACGTGTAGA
Ralstonia eutropha H16 H16_B1289 -174 7 CCTATACGTCTATACGTTTAGA
Cupriavidus taiwanensis RALTA_B1192 -174 7 CCTATACGTCTATACGTTTAGA
Position: -29
Score: 6.7
Sequence: TCTACACGTATAGACGTATAGG
Locus tag: Reut_B4186
Reut_B4186 -29 6.7 TCTACACGTATAGACGTATAGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: phnG
Ortholog function: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
Ralstonia metallidurans CH34 Rmet_0766 -29 7 TCTAAACGTATAGACGTATAGG
Ralstonia eutropha JMP134 Reut_B4186 -29 6.7 TCTACACGTATAGACGTATAGG
Ralstonia eutropha H16 H16_B1288 -26 7 TCTAAACGTATAGACGTATAGG
Cupriavidus taiwanensis RALTA_B1191 -23 7 TCTAAACGTATAGACGTATAGG
© 2009-2020 RegPrecise