Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of LexA regulog to Ralstonia eutropha JMP134

Reference regulog properties
Source regulog: LexA - Ralstonia
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Ralstonia eutropha JMP134
Orthologous TF(s) Reut_A2008
Regulated genes 6
Built upon 62 sites [see more]
Predicted regulatory interactions in Ralstonia eutropha JMP134
Locus tag Position Score Sequence
Position: -6
Score: 5.7
Sequence: GCCTGTATGGATATACAGTT
Locus tag: Reut_A0283
Reut_A0283 -6 5.7 GCCTGTATGGATATACAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uvrD
Ortholog function: ATP-dependent DNA helicase II
Ralstonia solanacearum GMI1000 RS05321 -39 6 TGCTGTATATTTATACAGTT
Ralstonia pickettii 12J Rpic_4129 -40 5.9 TGCTGTATATTCATACAGTT
Ralstonia metallidurans CH34 Rmet_0232 -66 5.6 GGCTGTATGGATATACAGTG
Ralstonia eutropha JMP134 Reut_A0283 -6 5.7 GCCTGTATGGATATACAGTT
Ralstonia eutropha H16 H16_A0305 -68 5.7 CCCTGTATGGATATACAGTT
Cupriavidus taiwanensis RALTA_A0247 -62 5.6 GGCTGTATGGATATACAGTT
Position: -194
Score: 6.1
Sequence: TACTGTTTTTTTATACAGTA
Locus tag: Reut_A0527
Reut_A0527 -194 6.1 TACTGTTTTTTTATACAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: recA
Ortholog function: Recombinase A
Ralstonia solanacearum GMI1000 RSc0551 -180 5.5 CACTGGTTTTTTATACAGTA
Ralstonia pickettii 12J Rpic_0471 -172 5.5 CACTGGTTTTTTATACAGTA
Ralstonia metallidurans CH34 Rmet_0466 -171 6.1 TACTGTTTTTTTATACAGTA
Ralstonia eutropha JMP134 Reut_A0527 -194 6.1 TACTGTTTTTTTATACAGTA
Ralstonia eutropha H16 H16_A0544 -159 6.1 TACTGTTTTTTTATACAGTA
Cupriavidus taiwanensis RALTA_A0499 -159 6.1 TACTGTTTTTTTATACAGTA
Position: -50
Score: 6.4
Sequence: TACTGTATATATTTACAGTA
Locus tag: Reut_B3817
Reut_B3817 -50 6.4 TACTGTATATATTTACAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: BPSS1334
Ortholog function: Conserved hypothetical protein
Ralstonia solanacearum GMI1000 RS00884 -44 5.9 GCCTGTATATATTTACAGTG
-29 5.2 CAGTGTACGTATATACAGTC
Ralstonia pickettii 12J Rpic_4716 -45 6 AACTGTATATATTCACAGTA
-26 5.3 AACTGTGAATTTATACAGTG
Ralstonia metallidurans CH34 Rmet_1637 -62 6.3 CACTGTATATATTTACAGTA
-43 5.2 AACTGTATGGATGAACAGTC
Ralstonia eutropha JMP134 Reut_B3817 -50 6.4 TACTGTATATATTTACAGTA
-31 5.3 ACCTGTATGGATAAACAGTG
Ralstonia eutropha H16 H16_B0943 -51 6.4 TACTGTATATATTTACAGTA
-32 5.3 ACCTGTATGGATGAACAGTA
Cupriavidus taiwanensis RALTA_B0767 -67 6.4 TACTGTATATATTTACAGTA
-48 5.1 ACCTGTATGGATGAACAGTG
Position: -160
Score: 5.6
Sequence: CACTGTACGGATATACAGTC
Locus tag: Reut_B4240
Reut_B4240 -160 5.6 CACTGTACGGATATACAGTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: uvrA
Ortholog function: Excinuclease ABC subunit A
Ralstonia metallidurans CH34 Rmet_4549 -150 6.1 CACTGTATGTTCATACAGTA
Ralstonia eutropha JMP134 Reut_B4240 -160 5.6 CACTGTACGGATATACAGTC
Ralstonia eutropha H16 H16_B1571 -72 5.7 GACTGTATGGATGTACAGTG
Cupriavidus taiwanensis RALTA_B1379 -71 5.7 GACTGTATGGATGTACAGTG
Position: -51
Score: 6
Sequence: GACTGTATATTCGTACAGTA
Locus tag: Reut_B5317
Reut_B5317 -51 6 GACTGTATATTCGTACAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: H16_B2553
Ortholog function: Conserved hypothetical protein
Ralstonia metallidurans CH34 Rmet_5910 -42 6.3 CACTGTATATTTATACAGTG
Ralstonia eutropha JMP134 Reut_B5317 -51 6 GACTGTATATTCGTACAGTA
Ralstonia eutropha H16 H16_B2553 -51 6 GACTGTATATTCGTACAGTA
Cupriavidus taiwanensis RALTA_B2284 -42 6 GACTGTATATTCGTACAGTA
Position: -44
Score: 6.1
Sequence: GACTGTATATTCATACAGTT
Locus tag: Reut_B5827
Reut_B5827 -44 6.1 GACTGTATATTCATACAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: PF06733
Ortholog function: DinG family ATP-dependent helicase CPE1197
Ralstonia eutropha JMP134 Reut_B5827 -44 6.1 GACTGTATATTCATACAGTT
Ralstonia eutropha H16 H16_B1265 -103 6.3 TACTGTATATTCATACAGTT
Cupriavidus taiwanensis RALTA_B1170 -88 6.2 TACTGTATATTTGTACAGTT
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