Propagation of Fur regulog to Ralstonia eutropha JMP134
| Source regulog: | Fur - Ralstonia |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor (activator) |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Proteobacteria/beta |
| Propagated regulon: | |
| Target genome | Ralstonia eutropha JMP134 |
| Orthologous TF(s) | Reut_A2837, Reut_B5530 |
| Regulated genes | 11 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -1
Score: 5.2 Sequence: AATGGGAATTGTTATCATT
Locus tag: Reut_A0298
|
||||
| Reut_A0298 | -1 | 5.2 | AATGGGAATTGTTATCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bfd | ||||
| Ortholog function: Bacterioferritin-associated ferredoxin | ||||
| Ralstonia solanacearum GMI1000 | RSc0349 | -77 | 5 | AACAAGAATTGTTCTCATT |
| Ralstonia pickettii 12J | Rpic_0205 | -75 | 5 | AACAAGAATTGTTCTCATT |
| Ralstonia metallidurans CH34 | Rmet_0247 | -91 | 5.2 | AATGGGAATTGTTATCATT |
| Ralstonia eutropha JMP134 | Reut_A0298 | -1 | 5.2 | AAtGggAATTgTTATCaTT |
| Ralstonia eutropha H16 | H16_A0327 | -89 | 5.2 | AATGGGAATTGTTATCATT |
| Cupriavidus taiwanensis | RALTA_A0266 | -56 | 5.2 | AATGGGAATTGTTATCATT |
|
Position: -187
Score: 5.3 Sequence: AATAAGAATCATTATCGTT
Locus tag: Reut_A2235
|
||||
| Reut_A2235 | -187 | 5.3 | AATAAGAATCATTATCGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tonB | ||||
| Ortholog function: Component of outer membrane metal uptake system, TonB family | ||||
| Ralstonia solanacearum GMI1000 | RSc1963 | -287 | 5 | AATGGGAATCATTATCGTT |
| Ralstonia pickettii 12J | Rpic_2116 | -289 | 4.9 | AATAGGAATCATTATCGTT |
| Ralstonia metallidurans CH34 | Rmet_2277 | -208 | 5.3 | AATAAGAATCATTATCGTT |
| Ralstonia eutropha JMP134 | Reut_A2235 | -187 | 5.3 | AATAAGAATCATTATCGTT |
| Ralstonia eutropha H16 | H16_A2532 | -208 | 5.3 | AATAAGAATCATTATCGTT |
| Cupriavidus taiwanensis | RALTA_A2036 | -206 | 5.3 | AATAAGAATCATTATCGTT |
|
Position: -107
Score: 5.1 Sequence: AATGGTAATGGTTCTCATT
Locus tag: Reut_A2238
|
||||
| Reut_A2238 | -107 | 5.1 | AATGGTAATGGTTCTCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemP | ||||
| Ortholog function: hemin uptake protein | ||||
| Ralstonia metallidurans CH34 | Rmet_2280 | -73 | 5.6 | AATGATAACAATTCTCATT |
| Ralstonia eutropha JMP134 | Reut_A2238 | -107 | 5.1 | AATGGTAATGGTTCTCATT |
| Ralstonia eutropha H16 | H16_A2535 | -81 | 5.6 | AATGATAACAATTCTCATT |
| Cupriavidus taiwanensis | RALTA_A2040 | -108 | 5.6 | AATGATAACAATTCTCATT |
|
Position: -90
Score: 5.2 Sequence: ATTGCGAATCATTATCATT
Locus tag: Reut_A2571
|
||||
| Reut_A2571 | -90 | 5.2 | ATTGCGAATCATTATCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: h16_A0796 | ||||
| Ortholog function: putative exported protein | ||||
| Ralstonia metallidurans CH34 | Rmet_0720 | -120 | 5 | ATTGATACTCATTATCATT |
| Ralstonia eutropha JMP134 | Reut_A2571 | -90 | 5.2 | ATTGCGAATCATTATCATT |
| Ralstonia eutropha H16 | H16_A0796 | -87 | 5.5 | ATTGAGAATCATTATTATT |
| Cupriavidus taiwanensis | RALTA_A0777 | -84 | 5.6 | ATTGAGAATCATTATCATT |
|
Position: -136
Score: 4.4 Sequence: AACGCAAATCATTCGCATT
Locus tag: Reut_A2876
|
||||
| Reut_A2876 | -136 | 4.4 | AACGCAAATCATTCGCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Reut_A2876 | ||||
| Ortholog function: putative TonB-dependent siderophore transporter | ||||
| Ralstonia pickettii 12J | Rpic_3802 | -136 | 4.8 | ATTGAGAATCGTTGTCATT |
| Ralstonia metallidurans CH34 | Rmet_3077 | -42 | 4.2 | AACGCGAATCGTTCGCATT |
| Ralstonia eutropha JMP134 | Reut_A2876 | -136 | 4.4 | AACGCAAATCATTCGCATT |
|
Position: -51
Score: 5 Sequence: AATGATAATGCTTCGCATT
Locus tag: Reut_A2878
|
||||
| Reut_A2878 | -51 | 5 | AATGATAATGCTTCGCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: h16_A3182 | ||||
| Ortholog function: putative iron-regulated TonB-dependent transporter | ||||
| Ralstonia solanacearum GMI1000 | RS02469 | -153 | 5.1 | AATGGGAATTGTTCTCATT |
| Ralstonia pickettii 12J | Rpic_4266 | -100 | 5.1 | AATAGGAATTGTTCTCATT |
| Ralstonia eutropha JMP134 | Reut_A2878 | -51 | 5 | AATGATAATGCTTCGCATT |
| Ralstonia eutropha H16 | H16_A3182 | -153 | 4.7 | AATAGGAATAATTCGCAAT |
| Cupriavidus taiwanensis | RALTA_A2655 | -92 | 4.7 | AATAGGAATAATTCGCAAT |
|
Position: -108
Score: 4.6 Sequence: CTTGATAATGATTCGCATT
Locus tag: Reut_B3686
|
||||
| Reut_B3686 | -108 | 4.6 | CTTGATAATGATTCGCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ffcA2 | ||||
| Ortholog function: putative iron-regulated TonB-dependent siderophore transporter | ||||
| Ralstonia solanacearum GMI1000 | RS00871 | -254 | 5 | ATCAAGAATGATTCTCATT |
| -70 | 5.6 | ATTGAGAATAATTCTCATT | ||
| Ralstonia eutropha JMP134 | Reut_B3686 | -108 | 4.6 | CTTGATAATGATTCGCATT |
|
Position: -72
Score: 4.8 Sequence: AACAATAACCGTTATCATT
Locus tag: Reut_B4646
|
||||
| Reut_B4646 | -72 | 4.8 | AACAATAACCGTTATCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Reut_B4646 | ||||
| Ortholog function: TonB-dependent siderophore transporter | ||||
| Ralstonia eutropha JMP134 | Reut_B4646 | -72 | 4.8 | AACAATAACCGTTATCATT |
|
Position: -180
Score: 4.7 Sequence: ATTACGAATGATTCGTATT
Locus tag: Reut_B4659
|
||||
| Reut_B4659 | -180 | 4.7 | ATTACGAATGATTCGTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Reut_B4659 | ||||
| Ortholog function: TonB-dependent siderophore transporter | ||||
| Ralstonia pickettii 12J | Rpic_0101 | -65 | 5.1 | AACGATAACAATTCTCATT |
| Ralstonia eutropha JMP134 | Reut_B4659 | -180 | 4.7 | ATTACGAATGATTCGTATT |
|
Position: -81
Score: 4.3 Sequence: ACTGATAATGATTCCTGTT
Locus tag: Reut_B4660
|
||||
| Reut_B4660 | -81 | 4.3 | ACTGATAATGATTCCTGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Reut_B4660 | ||||
| Ortholog function: 2OG-Fe(II) oxygenase | ||||
| Ralstonia pickettii 12J | Rpic_0099 | -65 | 5.1 | AACGATAACAATTCTCATT |
| Ralstonia eutropha JMP134 | Reut_B4660 | -81 | 4.3 | ACTGATAATGATTCCTGTT |
|
Position: -80
Score: 5.2 Sequence: AATGAAAACGATTTTCATT
Locus tag: Reut_B5430
|
||||
| Reut_B5430 | -80 | 5.2 | AATGAAAACGATTTTCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: feoA | ||||
| Ortholog function: Ferrous iron transport protein A | ||||
| Ralstonia solanacearum GMI1000 | RS03714 | -66 | 4.9 | AATGAAAACGATTCGCATT |
| Ralstonia pickettii 12J | Rpic_3949 | -61 | 4.9 | AATGAAAACGATTCGCATT |
| Ralstonia metallidurans CH34 | Rmet_5891 | -82 | 4.2 | ATCGAGAACGATTTCTATT |
| Ralstonia eutropha JMP134 | Reut_B5430 | -80 | 5.2 | AATGAAAACGATTTTCATT |
| Ralstonia eutropha H16 | H16_B0085 | -80 | 5.2 | AATGAAAACGATTTTCATT |
| Cupriavidus taiwanensis | RALTA_B0077 | -83 | 5.2 | AATGAAAACGATTTTCATT |