Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Fur regulog to Ralstonia eutropha JMP134

Reference regulog properties
Source regulog: Fur - Ralstonia
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Ralstonia eutropha JMP134
Orthologous TF(s) Reut_A2837, Reut_B5530
Regulated genes 11
Built upon 94 sites [see more]
Predicted regulatory interactions in Ralstonia eutropha JMP134
Locus tag Position Score Sequence
Position: -1
Score: 5.2
Sequence: AATGGGAATTGTTATCATT
Locus tag: Reut_A0298
Reut_A0298 -1 5.2 AATGGGAATTGTTATCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bfd
Ortholog function: Bacterioferritin-associated ferredoxin
Ralstonia solanacearum GMI1000 RSc0349 -77 5 AACAAGAATTGTTCTCATT
Ralstonia pickettii 12J Rpic_0205 -75 5 AACAAGAATTGTTCTCATT
Ralstonia metallidurans CH34 Rmet_0247 -91 5.2 AATGGGAATTGTTATCATT
Ralstonia eutropha JMP134 Reut_A0298 -1 5.2 AAtGggAATTgTTATCaTT
Ralstonia eutropha H16 H16_A0327 -89 5.2 AATGGGAATTGTTATCATT
Cupriavidus taiwanensis RALTA_A0266 -56 5.2 AATGGGAATTGTTATCATT
Position: -187
Score: 5.3
Sequence: AATAAGAATCATTATCGTT
Locus tag: Reut_A2235
Reut_A2235 -187 5.3 AATAAGAATCATTATCGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tonB
Ortholog function: Component of outer membrane metal uptake system, TonB family
Ralstonia solanacearum GMI1000 RSc1963 -287 5 AATGGGAATCATTATCGTT
Ralstonia pickettii 12J Rpic_2116 -289 4.9 AATAGGAATCATTATCGTT
Ralstonia metallidurans CH34 Rmet_2277 -208 5.3 AATAAGAATCATTATCGTT
Ralstonia eutropha JMP134 Reut_A2235 -187 5.3 AATAAGAATCATTATCGTT
Ralstonia eutropha H16 H16_A2532 -208 5.3 AATAAGAATCATTATCGTT
Cupriavidus taiwanensis RALTA_A2036 -206 5.3 AATAAGAATCATTATCGTT
Position: -107
Score: 5.1
Sequence: AATGGTAATGGTTCTCATT
Locus tag: Reut_A2238
Reut_A2238 -107 5.1 AATGGTAATGGTTCTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemP
Ortholog function: hemin uptake protein
Ralstonia metallidurans CH34 Rmet_2280 -73 5.6 AATGATAACAATTCTCATT
Ralstonia eutropha JMP134 Reut_A2238 -107 5.1 AATGGTAATGGTTCTCATT
Ralstonia eutropha H16 H16_A2535 -81 5.6 AATGATAACAATTCTCATT
Cupriavidus taiwanensis RALTA_A2040 -108 5.6 AATGATAACAATTCTCATT
Position: -90
Score: 5.2
Sequence: ATTGCGAATCATTATCATT
Locus tag: Reut_A2571
Reut_A2571 -90 5.2 ATTGCGAATCATTATCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: h16_A0796
Ortholog function: putative exported protein
Ralstonia metallidurans CH34 Rmet_0720 -120 5 ATTGATACTCATTATCATT
Ralstonia eutropha JMP134 Reut_A2571 -90 5.2 ATTGCGAATCATTATCATT
Ralstonia eutropha H16 H16_A0796 -87 5.5 ATTGAGAATCATTATTATT
Cupriavidus taiwanensis RALTA_A0777 -84 5.6 ATTGAGAATCATTATCATT
Position: -136
Score: 4.4
Sequence: AACGCAAATCATTCGCATT
Locus tag: Reut_A2876
Reut_A2876 -136 4.4 AACGCAAATCATTCGCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Reut_A2876
Ortholog function: putative TonB-dependent siderophore transporter
Ralstonia pickettii 12J Rpic_3802 -136 4.8 ATTGAGAATCGTTGTCATT
Ralstonia metallidurans CH34 Rmet_3077 -42 4.2 AACGCGAATCGTTCGCATT
Ralstonia eutropha JMP134 Reut_A2876 -136 4.4 AACGCAAATCATTCGCATT
Position: -51
Score: 5
Sequence: AATGATAATGCTTCGCATT
Locus tag: Reut_A2878
Reut_A2878 -51 5 AATGATAATGCTTCGCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: h16_A3182
Ortholog function: putative iron-regulated TonB-dependent transporter
Ralstonia solanacearum GMI1000 RS02469 -153 5.1 AATGGGAATTGTTCTCATT
Ralstonia pickettii 12J Rpic_4266 -100 5.1 AATAGGAATTGTTCTCATT
Ralstonia eutropha JMP134 Reut_A2878 -51 5 AATGATAATGCTTCGCATT
Ralstonia eutropha H16 H16_A3182 -153 4.7 AATAGGAATAATTCGCAAT
Cupriavidus taiwanensis RALTA_A2655 -92 4.7 AATAGGAATAATTCGCAAT
Position: -108
Score: 4.6
Sequence: CTTGATAATGATTCGCATT
Locus tag: Reut_B3686
Reut_B3686 -108 4.6 CTTGATAATGATTCGCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ffcA2
Ortholog function: putative iron-regulated TonB-dependent siderophore transporter
Ralstonia solanacearum GMI1000 RS00871 -254 5 ATCAAGAATGATTCTCATT
-70 5.6 ATTGAGAATAATTCTCATT
Ralstonia eutropha JMP134 Reut_B3686 -108 4.6 CTTGATAATGATTCGCATT
Position: -72
Score: 4.8
Sequence: AACAATAACCGTTATCATT
Locus tag: Reut_B4646
Reut_B4646 -72 4.8 AACAATAACCGTTATCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Reut_B4646
Ortholog function: TonB-dependent siderophore transporter
Ralstonia eutropha JMP134 Reut_B4646 -72 4.8 AACAATAACCGTTATCATT
Position: -180
Score: 4.7
Sequence: ATTACGAATGATTCGTATT
Locus tag: Reut_B4659
Reut_B4659 -180 4.7 ATTACGAATGATTCGTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Reut_B4659
Ortholog function: TonB-dependent siderophore transporter
Ralstonia pickettii 12J Rpic_0101 -65 5.1 AACGATAACAATTCTCATT
Ralstonia eutropha JMP134 Reut_B4659 -180 4.7 ATTACGAATGATTCGTATT
Position: -81
Score: 4.3
Sequence: ACTGATAATGATTCCTGTT
Locus tag: Reut_B4660
Reut_B4660 -81 4.3 ACTGATAATGATTCCTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Reut_B4660
Ortholog function: 2OG-Fe(II) oxygenase
Ralstonia pickettii 12J Rpic_0099 -65 5.1 AACGATAACAATTCTCATT
Ralstonia eutropha JMP134 Reut_B4660 -81 4.3 ACTGATAATGATTCCTGTT
Position: -80
Score: 5.2
Sequence: AATGAAAACGATTTTCATT
Locus tag: Reut_B5430
Reut_B5430 -80 5.2 AATGAAAACGATTTTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoA
Ortholog function: Ferrous iron transport protein A
Ralstonia solanacearum GMI1000 RS03714 -66 4.9 AATGAAAACGATTCGCATT
Ralstonia pickettii 12J Rpic_3949 -61 4.9 AATGAAAACGATTCGCATT
Ralstonia metallidurans CH34 Rmet_5891 -82 4.2 ATCGAGAACGATTTCTATT
Ralstonia eutropha JMP134 Reut_B5430 -80 5.2 AATGAAAACGATTTTCATT
Ralstonia eutropha H16 H16_B0085 -80 5.2 AATGAAAACGATTTTCATT
Cupriavidus taiwanensis RALTA_B0077 -83 5.2 AATGAAAACGATTTTCATT
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