Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Zur regulog to Ralstonia eutropha JMP134

Reference regulog properties
Source regulog: Zur - Ralstonia
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode:
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Ralstonia eutropha JMP134
Orthologous TF(s) Reut_A0164
Regulated genes 3
Built upon 19 sites [see more]
Predicted regulatory interactions in Ralstonia eutropha JMP134
Locus tag Position Score Sequence
Position: -66
Score: 6.3
Sequence: CAGTCGCAACTTTGTTGCAATAA
Locus tag: Reut_A0161
Reut_A0161 -66 6.3 CAGTCGCAACTTTGTTGCAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciC
Ortholog function: Putative zinc chaperone, COG0523 family
Ralstonia metallidurans CH34 Rmet_0125 -34 6.1 CAGTCGCAACTTTGTTGCATCAA
Ralstonia eutropha JMP134 Reut_A0161 -66 6.3 CAGTCGCAACTTTGTTGCAATAA
Ralstonia eutropha H16 H16_A0193 -75 6 AATTCGCAACCTTGTTGCAACAA
Cupriavidus taiwanensis RALTA_A0136 -76 5.9 AATTCGCAACCTTGTTGCAACAG
Position: -50
Score: 5.1
Sequence: CACACGCAACTGAATTGCAACAG
Locus tag: Reut_A0164
Reut_A0164 -50 5.1 CACACGCAACTGAATTGCAACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: zur
Ortholog function: Zinc uptake regulator, Fur family
Ralstonia pickettii 12J Rpic_3702 -50 5.2 CAATTGCAACTCAATTGCAGCAA
Position: -3
Score: 6.3
Sequence: TTGTTGCAACATTGTTGCGTTTG
Locus tag: Reut_A0876
Reut_A0876 -3 6.3 TTGTTGCAACATTGTTGCGTTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: zip
Ortholog function: Zinc transporter, ZIP family
Ralstonia solanacearum GMI1000 RS01372 -37 5.9 TTCTTGCAACTCTGTTGCGTTTG
Ralstonia pickettii 12J Rpic_2432 -48 6 TTCTTGCAACTCTGTTGCGTTTA
Ralstonia metallidurans CH34 Rmet_2621 -26 6.4 TTTTTGCAACATTGTTGCGTTAA
Ralstonia eutropha JMP134 Reut_A0876 -3 6.3 TTGTTGCAACATTGTTGCGTTTG
Ralstonia eutropha H16 H16_A2738 -35 6.4 TTATTGCAACATTGTTGCGTTAG
Cupriavidus taiwanensis RALTA_A2241 -35 6.4 TTATTGCAACATTGTTGCGTTTG
© 2009-2020 RegPrecise