Propagation of LiuQ regulog to Ralstonia eutropha JMP134
| Source regulog: | LiuQ - Ralstonia |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Phylum: | Proteobacteria/beta |
| Propagated regulon: | |
| Target genome | Ralstonia eutropha JMP134 |
| Orthologous TF(s) | Reut_A1468 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -167
Score: 5 Sequence: TTGACCAACACTCAA
Position: -59
Score: 5.3 Sequence: TTGAGCTACGCTCAA
Locus tag: Reut_A1467
|
||||
| Reut_A1467 | -167 | 5 | TTGACCAACACTCAA | |
| -59 | 5.3 | TTGAGCTACGCTCAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aacS | ||||
| Ortholog function: AMP-dependent synthetase and ligase | ||||
| Ralstonia metallidurans CH34 | Rmet_0610 | -149 | 5.1 | TTGAATGTTACTCAA |
| -48 | 5.6 | TTGAGTATTACTCAA | ||
| Ralstonia eutropha JMP134 | Reut_A1467 | -167 | 5 | TTGACCAACACTCAA |
| -59 | 5.3 | TTGAGCTACGCTCAA | ||
| Ralstonia eutropha H16 | H16_A1971 | -234 | 5.3 | TTGAGCTTTACTCAA |
| -59 | 5 | TTGAGTAACACTCAC | ||
| Cupriavidus taiwanensis | RALTA_A1548 | -215 | 4.6 | TTGAGTCAACCTCAA |
| -50 | 4.8 | TTGAGTTGTGCTCAA | ||
|
Position: -154
Score: 5.3 Sequence: TTGAGCGTAGCTCAA
Locus tag: Reut_A1468
|
||||
| Reut_A1468 | -154 | 5.3 | TTGAGCGTAGCTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: liuQ | ||||
| Ortholog function: Predicted branched-chain amino acid degradation regulator LiuQ, TetR family | ||||
| Ralstonia metallidurans CH34 | Rmet_0611 | -212 | 5.6 | TTGAGTAATACTCAA |
| -111 | 5.1 | TTGAGTAACATTCAA | ||
| Ralstonia eutropha JMP134 | Reut_A1468 | -154 | 5.3 | TTGAGCGTAGCTCAA |
| -46 | 5 | TTGAGTGTTGGTCAA | ||
| Ralstonia eutropha H16 | H16_A1970 | -247 | 5 | GTGAGTGTTACTCAA |
| -72 | 5.3 | TTGAGTAAAGCTCAA | ||