Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Paenibacillus sp. JDR-2

Reference regulog properties
Source regulog: Fur - Bacillales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Paenibacillus sp. JDR-2
Orthologous TF(s) Pjdr2_2329, Pjdr2_1270
Regulated genes 7
Built upon 200 sites [see more]
Predicted regulatory interactions in Paenibacillus sp. JDR-2
Locus tag Position Score Sequence
Position: -50
Score: 6.1
Sequence: ATTGATAATAATTATCATA
Locus tag: Pjdr2_0383
Pjdr2_0383 -50 6.1 ATTGATAATAATTATCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhfQ
Ortholog function: Putative iron(III) dicitrate-binding lipoprotein
Paenibacillus sp. JDR-2 Pjdr2_0383 -50 6.1 ATTGATAATAATTATCATA
Position: -137
Score: 5.9
Sequence: TATGATAATGATTATCAAC
Locus tag: Pjdr2_0424
Pjdr2_0424 -137 5.9 TATGATAATGATTATCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ywjA
Ortholog function: Multidrug resistance ABC transporter ATP-binding and permease protein
Bacillus subtilis subsp. subtilis str. 168 BSU37230 -44 5.4 ATTGAGAAATATTATCAGT
Bacillus amyloliquefaciens FZB42 RBAM_034370 -47 5.7 ATTGAGAAATATTATCATT
Bacillus pumilus SAFR-032 BPUM_3379 -46 6.5 ATTGAAAATGATTATCAAT
Bacillus cereus ATCC 14579 BC5182 -57 5.9 TTTGATAATGGTTATCATT
Bacillus halodurans C-125 BH3891 -52 6.1 ATTGAGAATGAATATCAAT
Paenibacillus sp. JDR-2 Pjdr2_0424 -137 5.9 TATGATAATGATTATCAAC
Position: -84
Score: 6.2
Sequence: ATTGACAATGATTATCATT
Locus tag: Pjdr2_0995
Pjdr2_0995 -84 6.2 ATTGACAATGATTATCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: efeM
Ortholog function: lipoprotein binding ferrous or ferric iron for transport
Bacillus subtilis subsp. subtilis str. 168 BSU38270 -34 6.5 AATGATAATCATTTTCAAT
Paenibacillus sp. JDR-2 Pjdr2_0995 -84 6.2 ATTGACAATGATTATCATT
Position: -83
Score: 4.6
Sequence: ATTCTAAATTATAATCATT
Position: -77
Score: 5.1
Sequence: AATTATAATCATTCTAAAT
Locus tag: Pjdr2_1270
Pjdr2_1270 -83 4.6 ATTCTAAATTATAATCATT
-77 5.1 AATTATAATCATTCTAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: Transcriptional regulator for iron transport and metabolism, Fur family
Bacillus amyloliquefaciens FZB42 RBAM_021640 -118 4.8 TTTTAGAATGATTATCACA
Bacillus pumilus SAFR-032 BPUM_2084 -78 4.7 ATTTAAAATGATTATAGTT
Bacillus licheniformis DSM 13 BLi02503 -119 5 ATTTATAATGATTATTAAA
-79 4.9 ATTTATAATGATTATAGTT
Geobacillus kaustophilus HTA426 GK2317 -102 5.3 TATAATAACCATTATCATT
Bacillus cereus ATCC 14579 BC4091 -101 5.8 TTTGAGAATAATTATCAAT
Bacillus halodurans C-125 BH1527 -103 4.7 ACTAATAATAATTATCTGT
-79 5.4 AATAATAATCATTATTAAT
Bacillus clausii KSM-K16 ABC1780 -102 4.9 AATGATATTCATTTGCAGA
Oceanobacillus iheyensis HTE831 OB1849 -96 4.8 TATTATAATTATTATAATT
Paenibacillus sp. JDR-2 Pjdr2_1270 -77 5.1 AATTATAATCATTCTAAAT
Position: -57
Score: 6.1
Sequence: ATTGATAATGATTATCACA
Locus tag: Pjdr2_3247
Pjdr2_3247 -57 6.1 ATTGATAATGATTATCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycgT
Ortholog function: Thioredoxin reductase (EC 1.8.1.9)
Paenibacillus sp. JDR-2 Pjdr2_3247 -57 6.1 ATTGATAATGATTATCACA
Position: -111
Score: 5.2
Sequence: TTTGATAACGATTCTCATA
Locus tag: Pjdr2_4366
Pjdr2_4366 -111 5.2 TTTGATAACGATTCTCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfiZ
Ortholog function: Iron(III) siderophore transport permease
Paenibacillus sp. JDR-2 Pjdr2_4366 -170 5 GATGATAATATTTCTCACT
-111 5.2 TTTGATAACGATTCTCATA
Position: -88
Score: 5.3
Sequence: ATTGATAATTGTTATCACG
Locus tag: Pjdr2_5637
Pjdr2_5637 -88 5.3 ATTGATAATTGTTATCACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfmF
Ortholog function: Iron-dicitrate ABC transporter (ATP-binding protein)
Bacillus subtilis subsp. subtilis str. 168 BSU07490 -46 5.8 TGTGATAATGATTCTCATT
Paenibacillus sp. JDR-2 Pjdr2_5637 -118 5.2 CCTGAGAACGATTATCATT
-88 5.3 ATTGATAATTGTTATCACG