Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LiuQ regulog to Burkholderia multivorans CGD1

Reference regulog properties
Source regulog: LiuQ - Ralstonia
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia multivorans CGD1
Orthologous TF(s) BURMUCGD1_3617
Regulated genes 2
Built upon 14 sites [see more]
Predicted regulatory interactions in Burkholderia multivorans CGD1
Locus tag Position Score Sequence
Position: -153
Score: 5.2
Sequence: CTGAGTTTTGCTCAA
Position: -52
Score: 5.5
Sequence: TTGAGTGACACTCAG
Locus tag: BURMUCGD1_3617
BURMUCGD1_3617 -153 5.2 CTGAGTTTTGCTCAA
-52 5.5 TTGAGTGACACTCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: liuQ
Ortholog function: Predicted branched-chain amino acid degradation regulator LiuQ, TetR family
Ralstonia metallidurans CH34 Rmet_0611 -212 5.6 TTGAGTAATACTCAA
-111 5.1 TTGAGTAACATTCAA
Ralstonia eutropha JMP134 Reut_A1468 -154 5.3 TTGAGCGTAGCTCAA
-46 5 TTGAGTGTTGGTCAA
Ralstonia eutropha H16 H16_A1970 -247 5 GTGAGTGTTACTCAA
-72 5.3 TTGAGTAAAGCTCAA
Position: -157
Score: 5.5
Sequence: CTGAGTGTCACTCAA
Position: -56
Score: 5.2
Sequence: TTGAGCAAAACTCAG
Locus tag: BURMUCGD1_3618
BURMUCGD1_3618 -157 5.5 CTGAGTGTCACTCAA
-56 5.2 TTGAGCAAAACTCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: liuA
Ortholog function: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Ralstonia eutropha JMP134 Reut_A1466 -167 5 TTGACCAACACTCAA
-59 5.3 TTGAGCTACGCTCAA
Ralstonia eutropha H16 H16_A1972 -234 5.3 TTGAGCTTTACTCAA
-59 5 TTGAGTAACACTCAC