Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of FadP regulog to Burkholderia sp. CCGE1002

Reference regulog properties
Source regulog: FadP - Ralstonia
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode:
Biological process: Fatty acid degradation
Effector:
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia sp. CCGE1002
Orthologous TF(s) BC1002_0379
Regulated genes 5
Built upon 85 sites [see more]
Predicted regulatory interactions in Burkholderia sp. CCGE1002
Locus tag Position Score Sequence
Position: -164
Score: 5.5
Sequence: TCGAACGATCGTTCTT
Locus tag: BC1002_0176
BC1002_0176 -164 5.5 TCGAACGATCGTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nppD
Ortholog function: 2-nitropropane dioxygenase NPD
Ralstonia metallidurans CH34 Rmet_0222 -39 5.4 TCGAACGATCGTTCCA
Ralstonia eutropha JMP134 Reut_A0268 -58 5.2 TCGAACGACCGTTCAT
Ralstonia eutropha H16 H16_A0293 -59 5.2 TCGAACGACCGTTCAT
Cupriavidus taiwanensis RALTA_A0233 -58 5.2 TCGAACGACCGTTCAC
Position: -52
Score: 5.3
Sequence: TAGTACGGCCGTTCGA
Locus tag: BC1002_0379
BC1002_0379 -52 5.3 TAGTACGGCCGTTCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadP
Ortholog function: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
Ralstonia solanacearum GMI1000 RS04423 -136 5.7 TTGAACGATCGTTCGA
Ralstonia pickettii 12J Rpic_0347 -136 5.6 TTGAACGACCGTTCGA
Ralstonia metallidurans CH34 Rmet_0384 -142 4.9 CTGAACGACCGTTCTT
Ralstonia eutropha JMP134 Reut_A0445 -140 4.9 CTGAACGACCGTTCTT
Ralstonia eutropha H16 H16_A0459 -143 4.9 CTGAACGACCGTTCTT
Cupriavidus taiwanensis RALTA_A0402 -141 4.9 CTGAACGACCGTTCTT
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