Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Burkholderia sp. CCGE1002

Reference regulog properties
Source regulog: Fur - Ralstonia
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia sp. CCGE1002
Orthologous TF(s) BC1002_2647
Regulated genes 6
Built upon 94 sites [see more]
Predicted regulatory interactions in Burkholderia sp. CCGE1002
Locus tag Position Score Sequence
Position: -41
Score: 5.5
Sequence: AATGATAATAATTCGCATT
Locus tag: BC1002_1027
BC1002_1027 -41 5.5 AATGATAATAATTCGCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bfd
Ortholog function: Bacterioferritin-associated ferredoxin
Ralstonia solanacearum GMI1000 RSc0349 -77 5 AACAAGAATTGTTCTCATT
Ralstonia pickettii 12J Rpic_0205 -75 5 AACAAGAATTGTTCTCATT
Ralstonia metallidurans CH34 Rmet_0247 -91 5.2 AATGGGAATTGTTATCATT
Ralstonia eutropha JMP134 Reut_A0298 -1 5.2 AAtGggAATTgTTATCaTT
Ralstonia eutropha H16 H16_A0327 -89 5.2 AATGGGAATTGTTATCATT
Cupriavidus taiwanensis RALTA_A0266 -56 5.2 AATGGGAATTGTTATCATT
Position: -67
Score: 4.7
Sequence: ATTGAGAACGCTTCTCAAT
Locus tag: BC1002_4446
BC1002_4446 -67 4.7 ATTGAGAACGCTTCTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Reut_B4659
Ortholog function: TonB-dependent siderophore transporter
Ralstonia pickettii 12J Rpic_0101 -65 5.1 AACGATAACAATTCTCATT
Ralstonia eutropha JMP134 Reut_B4659 -180 4.7 ATTACGAATGATTCGTATT
Position: -168
Score: 5
Sequence: AATGGGAATGATTCGCATT
Locus tag: BC1002_4512
BC1002_4512 -168 5 AATGGGAATGATTCGCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Rmet_1108
Ortholog function: putative TonB-dependent siderophore transporter
Ralstonia metallidurans CH34 Rmet_1108 -167 4.8 AATGCAAATGATTAGTATT
Position: -148
Score: 4.9
Sequence: AATGATAGCGATTCTCATT
Locus tag: BC1002_5013
BC1002_5013 -148 4.9 AATGATAGCGATTCTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Reut_A2876
Ortholog function: putative TonB-dependent siderophore transporter
Ralstonia pickettii 12J Rpic_3802 -136 4.8 ATTGAGAATCGTTGTCATT
Ralstonia metallidurans CH34 Rmet_3077 -42 4.2 AACGCGAATCGTTCGCATT
Ralstonia eutropha JMP134 Reut_A2876 -136 4.4 AACGCAAATCATTCGCATT