Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FapR regulog to Paenibacillus sp. JDR-2

Reference regulog properties
Source regulog: FapR - Bacillales
Regulator type: Transcription factor
Regulator family: FapR
Regulation mode: repressor
Biological process: Fatty acid biosynthesis
Effector: Malonyl-CoA
Phylum: Firmicutes
Propagated regulon:
Target genome Paenibacillus sp. JDR-2
Orthologous TF(s) Pjdr2_3495
Regulated genes 3
Built upon 48 sites [see more]
Predicted regulatory interactions in Paenibacillus sp. JDR-2
Locus tag Position Score Sequence
Position: -56
Score: 4.7
Sequence: GTATTAGTACCAGGTA
Position: -49
Score: 4.4
Sequence: TACCAGGTACTAAATT
Locus tag: Pjdr2_1440
Pjdr2_1440 -56 4.7 GTATTAGTACCAGGTA
-49 4.4 TACCAGGTACTAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fabHB
Ortholog function: 3-oxoacyl-[acyl-carrier-protein] synthase III (EC 2.3.1.41)
Bacillus subtilis subsp. subtilis str. 168 BSU10170 -58 4.6 TTTTTAGTACCAGATA
Bacillus amyloliquefaciens FZB42 RBAM_010400 -60 4.9 AAATTAGTACCAAGTA
Bacillus licheniformis DSM 13 BLi01097 -58 4.4 ATTTTAGTACCAGATA
Paenibacillus sp. JDR-2 Pjdr2_1440 -56 4.7 GTATTAGTACCAGGTA
Position: -91
Score: 4.6
Sequence: TATTTAGTACCAGGTT
Locus tag: Pjdr2_3495
Pjdr2_3495 -91 4.6 TATTTAGTACCAGGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fapR
Ortholog function: Transcriptional regulator of fatty acid biosynthesis
Paenibacillus sp. JDR-2 Pjdr2_3495 -91 4.6 TATTTAGTACCAGGTT
Position: -118
Score: 4.5
Sequence: TATCAGGTACTAATTC
Locus tag: Pjdr2_4960
Pjdr2_4960 -118 4.5 TATCAGGTACTAATTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: RBAM_006010
Ortholog function: 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41)
Paenibacillus sp. JDR-2 Pjdr2_4960 -118 4.5 TATCAGGTACTAATTC
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