Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LiuQ regulog to Burkholderia pseudomallei 14

Reference regulog properties
Source regulog: LiuQ - Ralstonia
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia pseudomallei 14
Orthologous TF(s) Bpse14_010100033592
Regulated genes 1
Built upon 14 sites [see more]
Predicted regulatory interactions in Burkholderia pseudomallei 14
Locus tag Position Score Sequence
Position: -67
Score: 5.3
Sequence: TTGAGCAACACTCAG
Locus tag: Bpse14_010100033592
Bpse14_010100033592 -67 5.3 TTGAGCAACACTCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: liuQ
Ortholog function: Predicted branched-chain amino acid degradation regulator LiuQ, TetR family
Ralstonia metallidurans CH34 Rmet_0611 -212 5.6 TTGAGTAATACTCAA
-111 5.1 TTGAGTAACATTCAA
Ralstonia eutropha JMP134 Reut_A1468 -154 5.3 TTGAGCGTAGCTCAA
-46 5 TTGAGTGTTGGTCAA
Ralstonia eutropha H16 H16_A1970 -247 5 GTGAGTGTTACTCAA
-72 5.3 TTGAGTAAAGCTCAA