Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FadP regulog to Burkholderia sp. 383

Reference regulog properties
Source regulog: FadP - Ralstonia
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode:
Biological process: Fatty acid degradation
Effector:
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia sp. 383
Orthologous TF(s) Bcep18194_A6049
Regulated genes 7
Built upon 85 sites [see more]
Predicted regulatory interactions in Burkholderia sp. 383
Locus tag Position Score Sequence
Position: -87
Score: 5.7
Sequence: TAGAACGACCGTGCTA
Locus tag: Bcep18194_A4473
Bcep18194_A4473 -87 5.7 TAGAACGACCGTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: acdH3
Ortholog function: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Ralstonia solanacearum GMI1000 RS02949 -101 5.5 TTGAACGACCGTGCTA
Ralstonia eutropha JMP134 Reut_A1408 -203 5.5 TTGAACGACCGTGCTA
Ralstonia eutropha H16 H16_A1530 -214 5.5 TTGAACGACCGTGCTA
Cupriavidus taiwanensis RALTA_A1471 -218 5.5 TTGAACGACCGTGCTA
Position: -104
Score: 5.8
Sequence: TAGAACGATCGTGCTA
Locus tag: Bcep18194_A4606
Bcep18194_A4606 -104 5.8 TAGAACGATCGTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: etfD
Ortholog function: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Ralstonia solanacearum GMI1000 RSc1567 -120 5.6 TCGAACGACCGTTCAA
Ralstonia pickettii 12J Rpic_1986 -121 5.2 TCGAACGATCGTTCAG
Ralstonia metallidurans CH34 Rmet_1146 -243 5.4 AAGAACGGTCGTTCAA
Ralstonia eutropha JMP134 Reut_A1262 -211 5.1 AAGAACGACCGTTCCA
Ralstonia eutropha H16 H16_A1324 -248 5.1 AAGAACGACCGTTCCA
Cupriavidus taiwanensis RALTA_A1245 -288 5.1 AAGAACGACCGTTCCA
Position: -60
Score: 5.3
Sequence: TAGCACGATCGTTCAC
Locus tag: Bcep18194_A5561
Bcep18194_A5561 -60 5.3 TAGCACGATCGTTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: RSc2046
Ortholog function: conserved hypothetical protein, DUF1178
Ralstonia solanacearum GMI1000 RS03611 -63 5.5 TAGCACGACCGTTCAA
Ralstonia pickettii 12J Rpic_2198 -85 5.1 GCGAACGGTCGTGCGA
-63 5.2 TAGCACGACCGTTCAC
Ralstonia metallidurans CH34 Rmet_0943 -62 5.2 TAGCACGACCGTTCAC
Ralstonia eutropha JMP134 Reut_A0977 -64 5.2 TAGCACGACCGTTCAC
Ralstonia eutropha H16 H16_A1066 -87 5.3 CCGAACGGTCGTTCTA
-64 5.2 TAGCACGACCGTTCAC
Cupriavidus taiwanensis RALTA_A1050 -87 5.4 ACGAACGGTCGTTCTA
-64 5.2 TAGCACGACCGTTCAC
Position: -52
Score: 5.3
Sequence: TAGTACGGCCGTTCGA
Locus tag: Bcep18194_A6049
Bcep18194_A6049 -52 5.3 TAGTACGGCCGTTCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadP
Ortholog function: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
Ralstonia solanacearum GMI1000 RS04423 -136 5.7 TTGAACGATCGTTCGA
Ralstonia pickettii 12J Rpic_0347 -136 5.6 TTGAACGACCGTTCGA
Ralstonia metallidurans CH34 Rmet_0384 -142 4.9 CTGAACGACCGTTCTT
Ralstonia eutropha JMP134 Reut_A0445 -140 4.9 CTGAACGACCGTTCTT
Ralstonia eutropha H16 H16_A0459 -143 4.9 CTGAACGACCGTTCTT
Cupriavidus taiwanensis RALTA_A0402 -141 4.9 CTGAACGACCGTTCTT
Position: -123
Score: 5.2
Sequence: TCGCACGATCGTTCGT
Locus tag: Bcep18194_A6315
Bcep18194_A6315 -123 5.2 TCGCACGATCGTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nppD
Ortholog function: 2-nitropropane dioxygenase NPD
Ralstonia metallidurans CH34 Rmet_0222 -39 5.4 TCGAACGATCGTTCCA
Ralstonia eutropha JMP134 Reut_A0268 -58 5.2 TCGAACGACCGTTCAT
Ralstonia eutropha H16 H16_A0293 -59 5.2 TCGAACGACCGTTCAT
Cupriavidus taiwanensis RALTA_A0233 -58 5.2 TCGAACGACCGTTCAC
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