Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NtrC regulog to Burkholderia sp. 383

Reference regulog properties
Source regulog: NtrC - Ralstonia
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia sp. 383
Orthologous TF(s) Bcep18194_A5456
Regulated genes 1
Built upon 28 sites [see more]
Predicted regulatory interactions in Burkholderia sp. 383
Locus tag Position Score Sequence
Position: -274
Score: 4.7
Sequence: CGCGCCGGAACGGTGCG
Locus tag: Bcep18194_A4310
Bcep18194_A4310 -274 4.7 CGCGCCGGAACGGTGCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: amtB
Ortholog function: Ammonium transporter
Ralstonia pickettii 12J Rpic_0087 -137 4.9 CGCACGACCATGGTGCG
Ralstonia metallidurans CH34 Rmet_4750 -185 4.5 TGCGCCATCACGGCGCA
Ralstonia eutropha JMP134 Reut_B4038 -232 4.7 TGCACCACTAAGGTTCA
-91 4.6 TCCACCATGAAGGTGCA
Ralstonia eutropha H16 H16_B1234 -221 5.1 CGCACCATAACGGTTCA
-188 4.9 CGCGCCATTTTGGCGCA
Cupriavidus taiwanensis RALTA_B1139 -187 4.9 CGCGCCATTTTGGCGCA