Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NtrC regulog to Burkholderia vietnamiensis G4

Reference regulog properties
Source regulog: NtrC - Ralstonia
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Burkholderia vietnamiensis G4
Orthologous TF(s) Bcep1808_2226
Regulated genes 2
Built upon 28 sites [see more]
Predicted regulatory interactions in Burkholderia vietnamiensis G4
Locus tag Position Score Sequence
Position: -132
Score: 4.7
Locus tag: Bcep1808_1116
Bcep1808_1116 -132 4.7 CGCCCCGTTTTCGTGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: amtB
Ortholog function: Ammonium transporter
Ralstonia pickettii 12J Rpic_0087 -137 4.9 CGCACGACCATGGTGCG
Ralstonia metallidurans CH34 Rmet_4750 -185 4.5 TGCGCCATCACGGCGCA
Ralstonia eutropha JMP134 Reut_B4038 -232 4.7 TGCACCACTAAGGTTCA
Ralstonia eutropha H16 H16_B1234 -221 5.1 CGCACCATAACGGTTCA
Cupriavidus taiwanensis RALTA_B1139 -187 4.9 CGCGCCATTTTGGCGCA