Propagation of KdgR regulog to Bacillus pumilus SAFR-032
| Source regulog: | KdgR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Galacturonate utilization; Glucuronate utilization |
| Effector: | 2-keto-3-deoxygluconate |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus pumilus SAFR-032 |
| Orthologous TF(s) | BPUM_3245 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -33
Score: 6 Sequence: TTTGAAACCGGTACCAAG
Locus tag: BPUM_3244
|
||||
| BPUM_3244 | -33 | 6 | TTTGAAACCGGTACCAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: kdgK | ||||
| Ortholog function: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) | ||||
| Bacillus licheniformis DSM 13 | BLi03827 | -197 | 6.2 | TTTGGTAACGGTTTCAAA |
| -42 | 6.1 | TTTGAAATCGGTTTCAAA | ||
| Bacillus pumilus SAFR-032 | BPUM_3244 | -33 | 6 | TTTGAAACCGGTACCAAG |
| Bacillus subtilis subsp. subtilis str. 168 | BSU22110 | -173 | 6.2 | TTTGGTAACGGTTTCAAA |
| -42 | 6.1 | TTTGAAATCGGTTTCAAA | ||
|
Position: -215
Score: 5.8 Sequence: TTTGGTATCGGTTTCAAG
Locus tag: BPUM_3245
|
||||
| BPUM_3245 | -215 | 5.8 | TTTGGTATCGGTTTCAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: kdgR | ||||
| Ortholog function: Transcriptional regulator of pectin utilization, LacI family | ||||
| Bacillus licheniformis DSM 13 | BLi03828 | -197 | 6.2 | TTTGGTAACGGTTTCAAA |
| -42 | 6.1 | TTTGAAATCGGTTTCAAA | ||
| Bacillus pumilus SAFR-032 | BPUM_3245 | -215 | 5.8 | TTTGGTATCGGTTTCAAG |
| -54 | 5.5 | TTTGAAATCGGTTTCGAA | ||
| Bacillus subtilis subsp. subtilis str. 168 | BSU22120 | -173 | 6.2 | TTTGGTAACGGTTTCAAA |
| -42 | 6.1 | TTTGAAATCGGTTTCAAA | ||
|
Position: -65
Score: 5.8 Sequence: CTTGAAACCGATACCAAA
Locus tag: BPUM_3246
|
||||
| BPUM_3246 | -65 | 5.8 | CTTGAAACCGATACCAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: kduI | ||||
| Ortholog function: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) | ||||
| Bacillus licheniformis DSM 13 | BLi03829 | -231 | 6.1 | TTTGAAACCGATTTCAAA |
| -76 | 6.2 | TTTGAAACCGTTACCAAA | ||
| Bacillus pumilus SAFR-032 | BPUM_3246 | -226 | 5.5 | TTCGAAACCGATTTCAAA |
| -65 | 5.8 | CTTGAAACCGATACCAAA | ||
| Bacillus subtilis subsp. subtilis str. 168 | BSU22130 | -197 | 6.1 | TTTGAAACCGATTTCAAA |
| -66 | 6.2 | TTTGAAACCGTTACCAAA | ||