Propagation of HTCS_Ara-2 regulog to Bacteroides finegoldii DSM 17565
| Source regulog: | HTCS_Ara-2 - Bacteroidaceae |
| Regulator type: | Transcription factor |
| Regulator family: | [Other] |
| Regulation mode: | activator (repressor) |
| Biological process: | Arabinan utilization |
| Effector: | Pectic galactan |
| Phylum: | Bacteroidetes |
| Propagated regulon: | |
| Target genome | Bacteroides finegoldii DSM 17565 |
| Orthologous TF(s) | BACFIN_04000 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -76
Score: 8.6 Sequence: TGCACGATTT-(12)-TAAAATATTT
Locus tag: BACFIN_04000
|
||||
| BACFIN_04000 | -76 | 8.6 | TGCACGATTT-(12)-TAAAATATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: HTCS_Ara-2 | ||||
| Ortholog function: Arabinan utilization hybrid two-component system, HTH AraC family | ||||
| Bacteroides ovatus ATCC 8483 | BACOVA_02667 | -76 | 8.5 | TGAACGATTT-(12)-TAAAATATTT |
| Bacteroides plebeius DSM 17135 | BACPLE_00182 | -56 | 6.8 | TGTATGATTT-(12)-TTCAATAAAT |
| Bacteroides thetaiotaomicron VPI-5482 | BT3049 | -81 | 8.9 | TGAATCATTT-(12)-TACAAGATTT |
|
Position: -140
Score: 9.7 Sequence: TGCATGATTT-(12)-TGCATGATTT
Locus tag: BACFIN_04001
|
||||
| BACFIN_04001 | -140 | 9.7 | TGCATGATTT-(12)-TGCATGATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BVU_0840 | ||||
| Ortholog function: Conserved hypothetical protein, presumably involved in arabinogalactan utilization | ||||
| Bacteroides cellulosilyticus DSM 14838 | BACCELL_01905 | -132 | 9.8 | TGCAAGATTT-(12)-TGCAAGATTT |
| Bacteroides dorei DSM 17855 | BACDOR_04891 | -133 | 9.8 | TGCAAGATTT-(12)-TGCAAGATTT |
| Bacteroides plebeius DSM 17135 | BACPLE_00181 | -107 | 9.1 | TGAATGATTT-(12)-TGCATGATGT |
| Bacteroides vulgatus ATCC 8482 | BVU_0840 | -133 | 9.8 | TGCAAGATTT-(12)-TGCAAGATTT |