Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of HTCS_Ara-2 regulog to Bacteroides finegoldii DSM 17565

Reference regulog properties
Source regulog: HTCS_Ara-2 - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator (repressor)
Biological process: Arabinan utilization
Effector: Pectic galactan
Phylum: Bacteroidetes
Propagated regulon:
Target genome Bacteroides finegoldii DSM 17565
Orthologous TF(s) BACFIN_04000
Regulated genes 2
Built upon 11 sites [see more]
Predicted regulatory interactions in Bacteroides finegoldii DSM 17565
Locus tag Position Score Sequence
Position: -76
Score: 8.6
Sequence: TGCACGATTT-(12)-TAAAATATTT
Locus tag: BACFIN_04000
BACFIN_04000 -76 8.6 TGCACGATTT-(12)-TAAAATATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: HTCS_Ara-2
Ortholog function: Arabinan utilization hybrid two-component system, HTH AraC family
Bacteroides ovatus ATCC 8483 BACOVA_02667 -76 8.5 TGAACGATTT-(12)-TAAAATATTT
Bacteroides plebeius DSM 17135 BACPLE_00182 -56 6.8 TGTATGATTT-(12)-TTCAATAAAT
Bacteroides thetaiotaomicron VPI-5482 BT3049 -81 8.9 TGAATCATTT-(12)-TACAAGATTT
Position: -140
Score: 9.7
Sequence: TGCATGATTT-(12)-TGCATGATTT
Locus tag: BACFIN_04001
BACFIN_04001 -140 9.7 TGCATGATTT-(12)-TGCATGATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: BVU_0840
Ortholog function: Conserved hypothetical protein, presumably involved in arabinogalactan utilization
Bacteroides cellulosilyticus DSM 14838 BACCELL_01905 -132 9.8 TGCAAGATTT-(12)-TGCAAGATTT
Bacteroides dorei DSM 17855 BACDOR_04891 -133 9.8 TGCAAGATTT-(12)-TGCAAGATTT
Bacteroides plebeius DSM 17135 BACPLE_00181 -107 9.1 TGAATGATTT-(12)-TGCATGATGT
Bacteroides vulgatus ATCC 8482 BVU_0840 -133 9.8 TGCAAGATTT-(12)-TGCAAGATTT
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