Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of ComA regulog to Bacillus pumilus SAFR-032

Reference regulog properties
Source regulog: ComA - Bacillales
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: activator
Biological process: Competence
Effector: ComP, sensor histidine kinase (ComX)
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus pumilus SAFR-032
Orthologous TF(s) BPUM_2837
Regulated genes 2
Built upon 16 sites [see more]
Predicted regulatory interactions in Bacillus pumilus SAFR-032
Locus tag Position Score Sequence
Position: -330
Score: 8.8
Sequence: ATTCGGCATAACGCAT-(17)-TTTCGG
Locus tag: BPUM_0319
BPUM_0319 -330 8.8 ATTCGGCATAACGCAT-(17)-TTTCGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: srfAC
Ortholog function: Surfactin synthetase subunit 1
Bacillus subtilis subsp. subtilis str. 168 BSU03480 -364 9.5 TTTCGGCATCCCGCAT-(17)-TTTCGG
Bacillus amyloliquefaciens FZB42 RBAM_003650 -337 9 TTTCGGTGTGCCGCAT-(17)-TTTCGG
Bacillus pumilus SAFR-032 BPUM_0319 -330 8.8 ATTCGGCATAACGCAT-(17)-TTTCGG
Bacillus pumilus SAFR-032 BPUM_0322 -330 8.8 ATTCGGCATAACGCAT-(17)-TTTCGG
Bacillus pumilus SAFR-032 BPUM_0323 -330 8.8 ATTCGGCATAACGCAT-(17)-TTTCGG
Bacillus licheniformis DSM 13 BLi00401 -405 8.2 TTTCGGGATCGCGCAT-(17)-ATTCGG
-372 9.3 ATTCGGTATCCCGCAT-(17)-TTTCGG
Position: -145
Score: 8.4
Sequence: TTGCGGTATCACGCAC-(16)-TTTCGG
Locus tag: BPUM_2841
BPUM_2841 -145 8.4 TTGCGGTATCACGCAC-(16)-TTTCGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: degQ
Ortholog function: Degradation enzyme regulation protein DegQ
Bacillus subtilis subsp. subtilis str. 168 BSU31720 -145 8.1 TTGCGGTGTCACGCAG-(16)-TTTCGG
Bacillus amyloliquefaciens FZB42 RBAM_028800 -146 8.1 TTGCGGTGTCACGCAG-(17)-TTTCGG
Bacillus pumilus SAFR-032 BPUM_2841 -145 8.4 TTGCGGTATCACGCAC-(16)-TTTCGG
Bacillus licheniformis DSM 13 BLi03360 -143 8.4 TTGCGGTGTAACGCAT-(16)-TTTCGG