Propagation of NanR regulog to Bacteroides finegoldii DSM 17565
| Source regulog: | NanR - Bacteroidaceae |
| Regulator type: | Transcription factor |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | Sialic acid utilization; N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine; N-acetylneuraminic acid |
| Phylum: | Bacteroidetes |
| Propagated regulon: | |
| Target genome | Bacteroides finegoldii DSM 17565 |
| Orthologous TF(s) | BACFIN_01763 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -267
Score: 6 Sequence: TATATAATAAAATATTTTATTAA
Position: -264
Score: 6.3 Sequence: ATAATAAAATATTTTATTAATAA
Position: -54
Score: 4.7 Sequence: ACATTTAATAAAAAAATTAATTA
Position: -50
Score: 5.8 Sequence: TTAATAAAAAAATTAATTATCTT
Locus tag: BACFIN_01763
|
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| BACFIN_01763 | -267 | 6 | TATATAATAAAATATTTTATTAA | |
| -264 | 6.3 | ATAATAAAATATTTTATTAATAA | ||
| -54 | 4.7 | ACATTTAATAAAAAAATTAATTA | ||
| -50 | 5.8 | TTAATAAAAAAATTAATTATCTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nanR | ||||
| Ortholog function: Putative N-acetylglucosamine repressor of sialic acid catabolism, ROK family | ||||
| Bacteroides cellulosilyticus DSM 14838 | BACCELL_04950 | -37 | 5.5 | ATATTAATAAAATTATTAAGTAT |
| Bacteroides dorei DSM 17855 | BACDOR_00695 | -217 | 5.5 | AAACTAAATTTATTTATTAATAA |
| Bacteroides eggerthii DSM 20697 | BACEGG_02291 | -58 | 6.2 | TAATTAATAAATTATTTTATTAT |
| Bacteroides fragilis NCTC 9343 | BF1711 | -52 | 4.8 | TTAATAAACAAATTAACTATCTT |
| Bacteroides ovatus ATCC 8483 | BACOVA_01791 | -50 | 5.8 | TTAATAAAAAAATTAATTATCTT |
| Bacteroides plebeius DSM 17135 | BACPLE_00597 | -88 | 5.4 | TAAATATAATAATTTATTAATGA |
| Bacteroides stercoris ATCC 43183 | BACSTE_01902 | -242 | 6 | TATATAATAAATTATTTTATTAT |
| Bacteroides thetaiotaomicron VPI-5482 | BT0433 | -51 | 5.8 | TTAATAAAAAAATTAATTATCTT |
| Bacteroides uniformis ATCC 8492 | BACUNI_02075 | -52 | 5.1 | AATTTACAAAATTATTTTAGTAT |
| Bacteroides vulgatus ATCC 8482 | BVU_4116 | -190 | 5.5 | AAACTAAATTTATTTATTAATAA |
|
Position: -137
Score: 6.3 Sequence: TTATTAATAAAATATTTTATTAT
Locus tag: BACFIN_01764
|
||||
| BACFIN_01764 | -137 | 6.3 | TTATTAATAAAATATTTTATTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SSF51445 | ||||
| Ortholog function: Glycoside hydrolase, superfamily SSF51445 | ||||
| Bacteroides ovatus ATCC 8483 | BACOVA_01793 | -103 | 6.3 | TTATTAATAAAATATTTTATTAT |
| -100 | 5.9 | TTAATAAAATATTTTATTATCTA | ||
| Bacteroides thetaiotaomicron VPI-5482 | BT0435 | -98 | 6.3 | TTATTAATAAAATATTTTATTAT |
| -95 | 5.9 | TTAATAAAATATTTTATTATCTA | ||
|
Position: -39
Score: 4.8 Sequence: ATAATAATCAATTAATTAATCTT
Locus tag: BACFIN_03322
|
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| BACFIN_03322 | -39 | 4.8 | ATAATAATCAATTAATTAATCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exbB | ||||
| Ortholog function: Outer membrane transport system, transport protein ExbB | ||||
| Bacteroides cellulosilyticus DSM 14838 | BACCELL_01010 | -44 | 5.7 | ATAATAAACAAATTAATTAATTA |
| Bacteroides coprophilus DSM 18228 | BACCOPRO_02433 | -43 | 5 | TTTATAAACTATTAATTAATTAA |
| Bacteroides eggerthii DSM 20697 | BACEGG_00309 | -44 | 5.5 | ATAATAAGTAATTTAATTAATTA |
| Bacteroides fragilis NCTC 9343 | BF3530 | -43 | 5.5 | ATAATAATAATTTAATTAATTAA |
| Bacteroides ovatus ATCC 8483 | BACOVA_00648 | -39 | 4.8 | ATAATAATCAATTAATTAATCTT |
| Bacteroides stercoris ATCC 43183 | BACSTE_03148 | -44 | 5.5 | ATAATAAGTAATTTAATTAATTA |
| Bacteroides thetaiotaomicron VPI-5482 | BT2055 | -39 | 4.8 | ATAATAATCAATTAATTAATCTT |
| Bacteroides uniformis ATCC 8492 | BACUNI_01658 | -44 | 5.9 | ATAATAAATAAATTAATTAATTA |