Propagation of Crp regulog to Bacteroides thetaiotaomicron VPI-5482
| Source regulog: | Crp - Bacteroidaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator |
| Biological process: | |
| Effector: | |
| Phylum: | Bacteroidetes |
| Propagated regulon: | |
| Target genome | Bacteroides thetaiotaomicron VPI-5482 |
| Orthologous TF(s) | BT4338 |
| Regulated genes | 14 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -105
Score: 6.2 Sequence: TTTTATGTTGCACAACATATAA
Locus tag: BT0356
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| BT0356 | -105 | 6.2 | TTTTATGTTGCACAACATATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araM | ||||
| Ortholog function: Aldose 1-epimerase (EC 5.1.3.3), L-arabinose mutarotase | ||||
| Bacteroides cellulosilyticus DSM 14838 | BACCELL_05604 | -105 | 6 | TTTTATGTTACATAACATATAC |
| Bacteroides dorei DSM 17855 | BACDOR_03634 | -104 | 5.6 | TTTTATGTTGCACAACATACTC |
| Bacteroides eggerthii DSM 20697 | BACEGG_01536 | -105 | 6.1 | TTTTATGTTACATAACATACAA |
| Bacteroides ovatus ATCC 8483 | BACOVA_01715 | -105 | 5.9 | ATTTATGCTGCACAACATATAA |
| Bacteroides plebeius DSM 17135 | BACPLE_02214 | -89 | 4.9 | TTCTATGTTGAAAAACATCTGA |
| Bacteroides thetaiotaomicron VPI-5482 | BT0356 | -105 | 6.2 | TTTTATGTTGCACAACATATAA |
| Bacteroides uniformis ATCC 8492 | BACUNI_01357 | -48 | 5.7 | ACTTATGTTGCATAACATATAA |
| Bacteroides vulgatus ATCC 8482 | BVU_2324 | -104 | 5.6 | TTTTATGTTGCACAACATACTC |
|
Position: -81
Score: 4.2 Sequence: AACAATGTTTTATAGCATGTCA
Locus tag: BT0791
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| BT0791 | -81 | 4.2 | AACAATGTTTTATAGCATGTCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylR | ||||
| Ortholog function: Predicted regulator of xylose utilization, NrtR family | ||||
| Bacteroides cellulosilyticus DSM 14838 | BACCELL_04758 | -83 | 4.9 | AATAGTGCTTTATAACATAATA |
| Bacteroides dorei DSM 17855 | BACDOR_00865 | -34 | 4.8 | AATAGTGTTTTAGAACATAATA |
| Bacteroides eggerthii DSM 20697 | BACEGG_02642 | -92 | 4.8 | AATAATGCTTTGTAACATATCA |
| Bacteroides fragilis NCTC 9343 | BF2354 | -81 | 4.6 | AACAATGCTTTATAGCATATTA |
| Bacteroides ovatus ATCC 8483 | BACOVA_02532 | -80 | 4.2 | AACAATGTTTTATAGCATGTTT |
| Bacteroides stercoris ATCC 43183 | BACSTE_01380 | -92 | 4.3 | AATAATGCTTTATAACATTGTA |
| Bacteroides thetaiotaomicron VPI-5482 | BT0791 | -81 | 4.2 | AACAATGTTTTATAGCATGTCA |
| Bacteroides uniformis ATCC 8492 | BACUNI_00695 | -92 | 4.1 | AATAATGCTTTATAATATTATA |
| Bacteroides vulgatus ATCC 8482 | BVU_3955 | -100 | 4.5 | AATAGTGTTTTGGAACATAATA |
|
Position: -67
Score: 6.3 Sequence: TTTTATGTTATTTAGCATAAAA
Locus tag: BT0832
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| BT0832 | -67 | 6.3 | TTTTATGTTATTTAGCATAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: serB | ||||
| Ortholog function: Phosphoserine phosphatase (EC 3.1.3.3) | ||||
| Bacteroides cellulosilyticus DSM 14838 | BACCELL_04825 | -163 | 5.5 | TTTCATGTTATATAACATGTTT |
| Bacteroides coprophilus DSM 18228 | BACCOPRO_01694 | -134 | 5.6 | AATTATGCTTTTAAACATAAAT |
| Bacteroides dorei DSM 17855 | BACDOR_02848 | -116 | 6.1 | AAATATGTTATATAGCATAAAA |
| Bacteroides eggerthii DSM 20697 | BACEGG_02676 | -74 | 6.3 | TTTTATGTTATTTAGCATAAAA |
| Bacteroides fragilis NCTC 9343 | BF2389 | -71 | 6.2 | TTTTATGTTATTTAGCATAAAT |
| Bacteroides ovatus ATCC 8483 | BACOVA_02567 | -66 | 6.3 | TTTTATGTTATTTAGCATAAAA |
| Bacteroides stercoris ATCC 43183 | BACSTE_01424 | -74 | 6.3 | TTTTATGTTATTTAGCATAAAA |
| Bacteroides thetaiotaomicron VPI-5482 | BT0832 | -67 | 6.3 | TTTTATGTTATTTAGCATAAAA |
| Bacteroides uniformis ATCC 8492 | BACUNI_00649 | -75 | 6.2 | TTTTATGTTATTTAGCATAAAT |
| Bacteroides vulgatus ATCC 8482 | BVU_3158 | -116 | 6.1 | AAATATGTTATATAGCATAAAA |
|
Position: -100
Score: 5.5 Sequence: TTTCCTGCTATAGAACATATTA
Locus tag: BT1272
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| BT1272 | -100 | 5.5 | TTTCCTGCTATAGAACATATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fucR | ||||
| Ortholog function: Transcriptional regulator of fucose utilization, GntR family | ||||
| Bacteroides cellulosilyticus DSM 14838 | BACCELL_04988 | -124 | 5.2 | TTATATGCTGCAAAACATATCC |
| Bacteroides dorei DSM 17855 | BACDOR_02265 | -114 | 5.1 | TCTTGTGTTATAAAACATACCA |
| Bacteroides fragilis NCTC 9343 | BF0210 | -114 | 5.6 | TTTGATGTTGTATAACATACCA |
| Bacteroides ovatus ATCC 8483 | BACOVA_03849 | -100 | 5.8 | TTTTCTGCTATAAAACATATCA |
| Bacteroides plebeius DSM 17135 | BACPLE_02898 | -93 | 4.6 | AAATCTGTTCTTAAACATAGCT |
| Bacteroides thetaiotaomicron VPI-5482 | BT1272 | -100 | 5.5 | TTTCCTGCTATAGAACATATTA |
| Bacteroides vulgatus ATCC 8482 | BVU_1374 | -114 | 5 | TCTTGTGTTATAAAACATACCT |
|
Position: -207
Score: 5.1 Sequence: TCTTATGTTTAACAACATACGT
Locus tag: BT1434
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| BT1434 | -207 | 5.1 | TCTTATGTTTAACAACATACGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxuR | ||||
| Ortholog function: Predicted transcriptional regulator for glucuronate catabolism, LacI family | ||||
| Bacteroides ovatus ATCC 8483 | BACOVA_00860 | -162 | 5.3 | TCTTATGTTTAACAACATGTAT |
| Bacteroides thetaiotaomicron VPI-5482 | BT1434 | -207 | 5.1 | TCTTATGTTTAACAACATACGT |
|
Position: -77
Score: 4.8 Sequence: CTGTATGTTGTAAAACACATAC
Locus tag: BT2096
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| BT2096 | -77 | 4.8 | CTGTATGTTGTAAAACACATAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BT1272 | ||||
| Ortholog function: Transcriptional regulator, GntR family | ||||
| Bacteroides fragilis NCTC 9343 | BF0315 | -90 | 5.7 | TATTATGTTACAAAACATATAC |
| Bacteroides thetaiotaomicron VPI-5482 | BT2096 | -77 | 4.8 | CTGTATGTTGTAAAACACATAC |
|
Position: -111
Score: 4.8 Sequence: GTATGTGTTTTACAACATACAG
Locus tag: BT2097
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| BT2097 | -111 | 4.8 | GTATGTGTTTTACAACATACAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: COG3533 | ||||
| Ortholog function: Six-hairpin glycosidase-like, COG3533 family | ||||
| Bacteroides thetaiotaomicron VPI-5482 | BT2097 | -111 | 4.8 | GTATGTGTTTTACAACATACAG |
|
Position: -135
Score: 5.4 Sequence: TTTTATGCTATAAAACATATCG
Locus tag: BT2178
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| BT2178 | -135 | 5.4 | TTTTATGCTATAAAACATATCG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BACCELL_00794 | ||||
| Ortholog function: hypothetical protein | ||||
| Bacteroides cellulosilyticus DSM 14838 | BACCELL_00794 | -135 | 6.1 | TTTTATGTTATAAAACATATTT |
| Bacteroides dorei DSM 17855 | BACDOR_04003 | -33 | 4.5 | TTTTAGGTTTAACAAATTAAAA |
| Bacteroides eggerthii DSM 20697 | BACEGG_00156 | -129 | 5.5 | TTTTGTGTTATAAAACATATTC |
| Bacteroides fragilis NCTC 9343 | BF3646 | -151 | 6 | TTTTATGTTGAATAACATATTT |
| Bacteroides ovatus ATCC 8483 | BACOVA_03166 | -135 | 5.8 | TTTTATGCTATAAAACATATTC |
| Bacteroides plebeius DSM 17135 | BACPLE_00736 | -116 | 5.5 | TTTTATGTTATCCAACATATTC |
| Bacteroides stercoris ATCC 43183 | BACSTE_03638 | -132 | 5.7 | TTTTGTGTTATAAAACATAATC |
| Bacteroides thetaiotaomicron VPI-5482 | BT2178 | -135 | 5.4 | TTTTATGCTATAAAACATATCG |
| Bacteroides uniformis ATCC 8492 | BACUNI_03316 | -125 | 5.7 | TTTTGTGTTATAAAACATATAC |
| Bacteroides vulgatus ATCC 8482 | BVU_2553 | -33 | 4.5 | TTTTAGGTTTAACAAATTAAAA |
|
Position: -69
Score: 5 Sequence: TTCCATGCTTTAAAACAGAATT
Locus tag: BT2831
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| BT2831 | -69 | 5 | TTCCATGCTTTAAAACAGAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: PF01694 | ||||
| Ortholog function: Peptidase S54, rhomboid domain | ||||
| Bacteroides cellulosilyticus DSM 14838 | BACCELL_02471 | -196 | 5 | TAATATGTTACACAAAAGATAT |
| -62 | 5.8 | TTTTCTGTTATAGAACAGAATT | ||
| Bacteroides dorei DSM 17855 | BACDOR_01705 | -71 | 6.2 | TTTTCTGTTATATAACAGAATA |
| Bacteroides eggerthii DSM 20697 | BACEGG_03101 | -188 | 5.3 | TAATATGTTACACAAAAGAAAA |
| -61 | 5.8 | TTTTCTGTTATAGAACAGAATT | ||
| Bacteroides fragilis NCTC 9343 | BF4221 | -227 | 5 | ATATATGTTACACAAAAGATAT |
| -105 | 5.7 | TTTTCTGTTGTAGAACAGAATT | ||
| Bacteroides ovatus ATCC 8483 | BACOVA_02079 | -195 | 5 | ATATATGTTACACAAAAGATTA |
| -66 | 5.4 | TTTCATGCTTTAAAACAGAATT | ||
| Bacteroides stercoris ATCC 43183 | BACSTE_02140 | -188 | 4.3 | TTAATTGTTACACAAAAGAAAA |
| -61 | 5.8 | TTTTCTGTTATAGAACAGAATT | ||
| Bacteroides thetaiotaomicron VPI-5482 | BT2831 | -192 | 4.9 | ATATATGTTACACAAAAGATTT |
| -69 | 5 | TTCCATGCTTTAAAACAGAATT | ||
| Bacteroides uniformis ATCC 8492 | BACUNI_03999 | -230 | 5 | TAATATGTTACACAAAAGATAT |
| -97 | 5.8 | TTTTCTGTTATAGAACAGAATT | ||
| Bacteroides vulgatus ATCC 8482 | BVU_0995 | -71 | 6.2 | TTTTCTGTTATATAACAGAATA |
|
Position: -271
Score: 5.7 Sequence: CATTATGTTCTATAACATAAAA
Locus tag: BT4330
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| BT4330 | -271 | 5.7 | CATTATGTTCTATAACATAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nupG | ||||
| Ortholog function: Nucleoside permease NupG | ||||
| Bacteroides eggerthii DSM 20697 | BACEGG_01333 | -193 | 5.8 | GACTATGTTATATAACATAAAA |
| Bacteroides ovatus ATCC 8483 | BACOVA_05132 | -269 | 5.6 | CATTATGTTGTATAACATAAAC |
| Bacteroides thetaiotaomicron VPI-5482 | BT4330 | -271 | 5.7 | CATTATGTTCTATAACATAAAA |
| Bacteroides uniformis ATCC 8492 | BACUNI_01546 | -245 | 5 | CAGCATGTTATATAACATAAAC |
|
Position: -33
Score: 4.8 Sequence: TTTTGTGCTGTATAACACAGTT
Locus tag: BT4338
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| BT4338 | -33 | 4.8 | TTTTGTGCTGTATAACACAGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: crp | ||||
| Ortholog function: transcriptional regulator, Crp/Fnr family | ||||
| Bacteroides cellulosilyticus DSM 14838 | BACCELL_03476 | -33 | 4.7 | ATTTGTGCTGTATAACACAGTT |
| Bacteroides coprophilus DSM 18228 | BACCOPRO_01276 | -33 | 4.6 | TTTTGTGCTTAATAACACGATT |
| Bacteroides dorei DSM 17855 | BACDOR_01607 | -35 | 4.1 | ATTTGTGCTCTATAACACGGTT |
| Bacteroides eggerthii DSM 20697 | BACEGG_01340 | -33 | 4.6 | ATTTGTGCTGTACAACACAGTT |
| Bacteroides fragilis NCTC 9343 | BF0954 | -33 | 4.6 | ATTTGTGCTTTATAACACAGTT |
| Bacteroides ovatus ATCC 8483 | BACOVA_05152 | -33 | 4.8 | TTTTGTGCTGTATAACACAGTT |
| Bacteroides plebeius DSM 17135 | BACPLE_02167 | -16 | 4.1 | CTTTGTGCTTAATAACATGGTT |
| Bacteroides stercoris ATCC 43183 | BACSTE_03515 | -33 | 4.6 | ATTTGTGCTGTACAACACAGTT |
| Bacteroides thetaiotaomicron VPI-5482 | BT4338 | -33 | 4.8 | TTTTGTGCTGTATAACACAGTT |
| Bacteroides uniformis ATCC 8492 | BACUNI_04721 | -33 | 4.7 | ATTTGTGCTGTATAACACAGTT |
| Bacteroides vulgatus ATCC 8482 | BVU_3580 | -35 | 4.1 | ATTTGTGCTCTATAACACGGTT |
|
Position: -114
Score: 6.1 Sequence: TTTTATGTTGAAAAGCATAAAA
Locus tag: BT4738
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| BT4738 | -114 | 6.1 | TTTTATGTTGAAAAGCATAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pflB | ||||
| Ortholog function: Pyruvate formate-lyase (EC 2.3.1.54) | ||||
| Bacteroides cellulosilyticus DSM 14838 | BACCELL_03929 | -107 | 6 | TTTTATGTCGTACAACATAAAA |
| Bacteroides eggerthii DSM 20697 | BACEGG_01611 | -4 | 6.1 | TTTTATGTTCTTCAGCATAAAA |
| Bacteroides fragilis NCTC 9343 | BF1323 | -107 | 6.3 | TTTTATGCTATTCAACATAAAA |
| Bacteroides ovatus ATCC 8483 | BACOVA_05597 | -113 | 6.1 | TTTTATGTTGAAAAGCATAAAA |
| Bacteroides stercoris ATCC 43183 | BACSTE_00806 | -116 | 6.1 | TTTTATGCTCTTCAACATAAAA |
| Bacteroides thetaiotaomicron VPI-5482 | BT4738 | -114 | 6.1 | TTTTATGTTGAAAAGCATAAAA |
| Bacteroides uniformis ATCC 8492 | BACUNI_04526 | -117 | 6.2 | TTTTATGCTGTTCAACATAAAA |