Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of HcpR regulog to Bacteroides fragilis YCH46

Reference regulog properties
Source regulog: HcpR - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Bacteroidetes
Propagated regulon:
Target genome Bacteroides fragilis YCH46
Orthologous TF(s) BF2148
Regulated genes 2
Built upon 18 sites [see more]
Predicted regulatory interactions in Bacteroides fragilis YCH46
Locus tag Position Score Sequence
Position: -88
Score: 6
Sequence: TTGTAACATTGGTTACAG
Locus tag: BF2147
BF2147 -88 6 TTGTAACATTGGTTACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Bacteroides cellulosilyticus DSM 14838 BACCELL_02847 -292 5.7 GTGTAACATACGTGACAA
Bacteroides coprophilus DSM 18228 BACCOPRO_00666 -87 5.3 GTGTCACATAAGTTACAG
Bacteroides dorei DSM 17855 BACDOR_04541 -35 6.1 CTGTAACATATGGTACAA
Bacteroides fragilis NCTC 9343 BF2204 -88 6 TTGTAACATTGGTTACAG
Bacteroides ovatus ATCC 8483 BACOVA_02390 -91 6 TTGTAACATTGGTTACAG
Bacteroides plebeius DSM 17135 BACPLE_00933 -87 5.5 GTGTCACATAGGTGACAG
Bacteroides thetaiotaomicron VPI-5482 BT_0687 -91 5.9 ATGTAACATTGGTTACAA
Bacteroides uniformis ATCC 8492 BACUNI_04425 -145 5.6 ATGTAACATTCGTGACAG
Bacteroides vulgatus ATCC 8482 BVU_2981 -71 6.1 CTGTAACATATGGTACAA
Position: -73
Score: 6
Sequence: CTGTAACATTGGTTACAA
Locus tag: BF3507
BF3507 -73 6 CTGTAACATTGGTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dnrN
Ortholog function: Nitric oxide-dependent regulator DnrN or NorA
Bacteroides coprophilus DSM 18228 BACCOPRO_02571 -72 5.8 ATGTAACCTATGTGACAA
Bacteroides dorei DSM 17855 BACDOR_04540 -35 6.1 CTGTAACATATGGTACAA
Bacteroides fragilis NCTC 9343 BF3316 -64 6 CTGTAACATTGGTTACAA
Bacteroides plebeius DSM 17135 BACPLE_01452 -74 5.5 GTGTCACGTATGTGACAA
Bacteroides vulgatus ATCC 8482 BVU_2980 -71 6.1 CTGTAACATATGGTACAA
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