Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GlnR regulog to Bacillus pumilus SAFR-032

Reference regulog properties
Source regulog: GlnR - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Nitrogen assimilation
Effector: Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus pumilus SAFR-032
Orthologous TF(s) BPUM_1636, BPUM_1230
Regulated genes 2
Built upon 45 sites [see more]
Predicted regulatory interactions in Bacillus pumilus SAFR-032
Locus tag Position Score Sequence
Position: -81
Score: 4.9
Sequence: GTGTTATATTTTCTAACAA
Locus tag: BPUM_1230
BPUM_1230 -81 4.9 GTGTTATATTTTCTAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tnrA
Ortholog function: Transcriptional regulator of nitrogen assimilation, MerR family
Bacillus subtilis subsp. subtilis str. 168 BSU13310 -82 5.4 ATGTTAGAAAATATGACAA
Bacillus pumilus SAFR-032 BPUM_1230 -122 4.3 TTGTCAACTTTCCTTCCAT
-81 4.9 GTGTTATATTTTCTAACAA
Bacillus licheniformis DSM 13 BLi01490 -82 4.9 ATGTTAGATTTTCTGACAG
Anoxybacillus flavithermus WK1 Aflv_1544 -114 5.2 TTGTTACTTTTTATAACAT
-83 5.1 TTGTTACTTTTTATAACAA
-28 5.5 ATGTTATAAAATATGACAT
Geobacillus kaustophilus HTA426 GK1860 -87 4.8 ATGTTAATTTTATTTACAA
-34 4.7 ACGTTAGAAAATATAACGT
Bacillus halodurans C-125 BH1494 -111 5.4 TTGTAAGAAAATCTAACAT
Bacillus clausii KSM-K16 ABC1760 -100 5.4 TTGTTAGATTTTCTTACAT
Oceanobacillus iheyensis HTE831 OB1650 -81 5.5 ATGTTAGAAATACTAACAT
Paenibacillus sp. JDR-2 Pjdr2_5154 -303 5.5 TTGTTAGATAATCTAACAT
-42 4.8 GTGTTAGAAAACATTACAT
Position: -83
Score: 5.3
Sequence: ATGTTAATATTCCTAACAT
Position: -60
Score: 5.1
Sequence: TTGACATATAATATAACAT
Position: -55
Score: 4.6
Sequence: ATATAATATAACATGACAT
Locus tag: BPUM_1636
BPUM_1636 -83 5.3 ATGTTAATATTCCTAACAT
-60 5.1 TTGACATATAATATAACAT
-55 4.6 ATATAATATAACATGACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnR
Ortholog function: Transcriptional regulator of nitrogen excess response, MerR family
Bacillus subtilis subsp. subtilis str. 168 BSU17450 -83 5.3 ATGTTAAGAATCCTTACAT
-60 5 TTGACACATAATATAACAT
Bacillus amyloliquefaciens FZB42 RBAM_017250 -83 5.3 ATGTTAAGATTCCTTACAT
-60 5 TTGACACAAAATATAACAT
Bacillus pumilus SAFR-032 BPUM_1636 -83 5.3 ATGTTAATATTCCTAACAT
-60 5.1 TTGACATATAATATAACAT
-55 4.6 ATATAATATAACATGACAT
Bacillus licheniformis DSM 13 BLi01992 -82 5.2 ATGTAAAGAATCCTTACAT
-59 5 TTGACACATTATATAACAT
Anoxybacillus flavithermus WK1 Aflv_1508 -83 4.8 ATGTGATAAAATGTAACGT
-60 4.8 TTGACATATAAGTTAACAT
Geobacillus kaustophilus HTA426 GK1326 -82 4.5 TTGTGAGGAAACATCACGT
Bacillus cereus ATCC 14579 BC3706 -84 5.3 ATGTAAGAAAAGCTAACAT
-62 4.8 TTGACACTAAACATAACAT