Propagation of HTCS_Rgu-1 regulog to Bacteroides vulgatus ATCC 8482
| Source regulog: | HTCS_Rgu-1 - Bacteroidaceae |
| Regulator type: | Transcription factor |
| Regulator family: | [Other] |
| Regulation mode: | activator |
| Biological process: | Rhamnogalacturonides utilization |
| Effector: | Rhamogalacturonate oligosaccharides; Galacturonate oligosaccharides |
| Phylum: | Bacteroidetes |
| Propagated regulon: | |
| Target genome | Bacteroides vulgatus ATCC 8482 |
| Orthologous TF(s) | BVU_1816 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -105
Score: 9.4 Sequence: CAAATAATACAC-(9)-TGAAAAGTGCAC
Locus tag: BVU_1797
|
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| BVU_1797 | -105 | 9.4 | CAAATAATACAC-(9)-TGAAAAGTGCAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rhiN | ||||
| Ortholog function: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) | ||||
| Bacteroides cellulosilyticus DSM 14838 | BACCELL_03119 | -106 | 9.3 | TAAATAATGCAC-(9)-CGAAAAGTACAC |
| Bacteroides dorei DSM 17855 | BACDOR_03278 | -105 | 9.4 | CAAATAATACAC-(9)-TGAAAAGTGCAC |
| Bacteroides eggerthii DSM 20697 | BACEGG_00863 | -107 | 9.7 | CAAAAAATGCAC-(9)-CAAAAAATGCAC |
| Bacteroides ovatus ATCC 8483 | BACOVA_04900 | -155 | 8.9 | CAAAAAATGCAC-(9)-TAAAAAATCCCA |
| Bacteroides plebeius DSM 17135 | BACPLE_03451 | -108 | 7.7 | CAATTTTTATAC-(9)-TGAAAACTACAC |
| Bacteroides stercoris ATCC 43183 | BACSTE_03304 | -107 | 9.8 | CAAAAAATGCAC-(9)-CAAAAAGTGCAC |
| Bacteroides thetaiotaomicron VPI-5482 | BT4108 | -105 | 9.1 | CAAAAAATACAC-(9)-TAAAAAATCCCA |
| Bacteroides vulgatus ATCC 8482 | BVU_1797 | -105 | 9.4 | CAAATAATACAC-(9)-TGAAAAGTGCAC |
|
Position: -123
Score: 9 Sequence: TAATAAATCCAC-(9)-TAAAAACTACAC
Locus tag: BVU_1799
|
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| BVU_1799 | -123 | 9 | TAATAAATCCAC-(9)-TAAAAACTACAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: susC_Rgu-1 | ||||
| Ortholog function: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides | ||||
| Bacteroides dorei DSM 17855 | BACDOR_03276 | -124 | 9 | TAATAAATCCAC-(9)-TAAAAACTACAC |
| Bacteroides vulgatus ATCC 8482 | BVU_1799 | -123 | 9 | TAATAAATCCAC-(9)-TAAAAACTACAC |
|
Position: -106
Score: 8.9 Sequence: TAAAATATACGA-(9)-CAAATATTACAA
Locus tag: BVU_1813
|
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| BVU_1813 | -106 | 8.9 | TAAAATATACGA-(9)-CAAATATTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: plyC4 | ||||
| Ortholog function: Pectate lyase C | ||||
| Bacteroides dorei DSM 17855 | BACDOR_03257 | -106 | 8.9 | TAAAATATACGA-(9)-CAAATATTACAA |
| Bacteroides vulgatus ATCC 8482 | BVU_1813 | -106 | 8.9 | TAAAATATACGA-(9)-CAAATATTACAA |
|
Position: -237
Score: 9.5 Sequence: CAAAAAATCCAC-(9)-CAAATAGTGCAC
Locus tag: BVU_1985
|
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| BVU_1985 | -237 | 9.5 | CAAAAAATCCAC-(9)-CAAATAGTGCAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pehX1 | ||||
| Ortholog function: Polygalacturonase (EC 3.2.1.15 ) | ||||
| Bacteroides dorei DSM 17855 | BACDOR_03070 | -237 | 9.5 | CAAAAAATCCAC-(9)-CAAATAGTGCAC |
| Bacteroides vulgatus ATCC 8482 | BVU_1985 | -237 | 9.5 | CAAAAAATCCAC-(9)-CAAATAGTGCAC |