Propagation of NanR regulog to Parabacteroides merdae ATCC 43184
| Source regulog: | NanR - Bacteroidaceae |
| Regulator type: | Transcription factor |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | Sialic acid utilization; N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine; N-acetylneuraminic acid |
| Phylum: | Bacteroidetes |
| Propagated regulon: | |
| Target genome | Parabacteroides merdae ATCC 43184 |
| Orthologous TF(s) | No orthologous TFs found |
| Regulated genes | 1 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -139
Score: 4.9 Sequence: TTAATAAAACATTCTTTTCTTTA
Position: -82
Score: 5.8 Sequence: ATATTATTAAAATATTTTATTTA
Position: -79
Score: 5.9 Sequence: TTATTAAAATATTTTATTTATAT
Locus tag: PARMER_00323
|
||||
| PARMER_00323 | -139 | 4.9 | TTAATAAAACATTCTTTTCTTTA | |
| -82 | 5.8 | ATATTATTAAAATATTTTATTTA | ||
| -79 | 5.9 | TTATTAAAATATTTTATTTATAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nanA | ||||
| Ortholog function: N-acetylneuraminate lyase (EC 4.1.3.3) | ||||
| Bacteroides coprophilus DSM 18228 | BACCOPRO_02518 | -30 | 5.8 | TAAATAAATAATTTTATTAAATA |
| Bacteroides dorei DSM 17855 | BACDOR_00694 | -111 | 5.5 | TTATTAATAAATAAATTTAGTTT |
| -40 | 4.8 | TAAGTAATATAAAATATTCATTT | ||
| Bacteroides eggerthii DSM 20697 | BACEGG_02294 | -85 | 6 | TTAATAAAATAATTTATTAAATA |
| Bacteroides fragilis NCTC 9343 | BF1712 | -150 | 6.3 | TTATTAATAAAATATTTTATTAT |
| -41 | 5.3 | ATATTAAAAATCTATATCATTAA | ||
| Bacteroides ovatus ATCC 8483 | BACOVA_00275 | -194 | 4.9 | AAAATAACTAAATATATTAAACT |
| Bacteroides stercoris ATCC 43183 | BACSTE_01905 | -94 | 5.8 | TATTTAATAAAATAAATTATTAA |
| Bacteroides vulgatus ATCC 8482 | BVU_4117 | -111 | 5.5 | TTATTAATAAATAAATTTAGTTT |
| -108 | 5.2 | TTAATAAATAAATTTAGTTTTTA | ||
| -40 | 4.8 | TAAGTAATATAAAATATTCATTT | ||