Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HTCS_Hep regulog to Bacteroides ovatus ATCC 8483

Reference regulog properties
Source regulog: HTCS_Hep - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator (repressor)
Biological process: Heparin utilization
Effector: Heparin
Phylum: Bacteroidetes
Propagated regulon:
Target genome Bacteroides ovatus ATCC 8483
Orthologous TF(s) BACOVA_05479
Regulated genes 3
Built upon 10 sites [see more]
Predicted regulatory interactions in Bacteroides ovatus ATCC 8483
Locus tag Position Score Sequence
Position: -140
Score: 8.4
Sequence: AGAAATTTAA-(11)-ACAAAATCAA
Locus tag: BACOVA_05474
BACOVA_05474 -140 8.4 AGAAATTTAA-(11)-ACAAAATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hepH
Ortholog function: Glucuronyl hydrolase ( 3.2.1.-)
Bacteroides ovatus ATCC 8483 BACOVA_05474 -140 8.4 AGAAATTTAA-(11)-ACAAAATCAA
Bacteroides thetaiotaomicron VPI-5482 BT4658 -140 8 AGAATATTAA-(11)-ACAAATTCAA
Position: -148
Score: 7.6
Sequence: ACATTATTAA-(11)-ACAATATTAA
Locus tag: BACOVA_05478
BACOVA_05478 -148 7.6 ACATTATTAA-(11)-ACAATATTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hepL1
Ortholog function: Heparinase III protein / Heparitin sulfate lyase (EC 4.2.2.8)
Bacteroides ovatus ATCC 8483 BACOVA_05478 -148 7.6 ACATTATTAA-(11)-ACAATATTAA
Position: -92
Score: 8.5
Sequence: ACAAATGTGA-(11)-ACAAAAGAAA
Locus tag: BACOVA_05497
BACOVA_05497 -92 8.5 ACAAATGTGA-(11)-ACAAAAGAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hepC
Ortholog function: Heparin lyase I / Heparinase I (EC 4.2.2.7)
Bacteroides eggerthii DSM 20697 BACEGG_00070 -94 8.4 ACAAATATAG-(11)-ACAAATAGGA
Bacteroides ovatus ATCC 8483 BACOVA_05497 -92 8.5 ACAAATGTGA-(11)-ACAAAAGAAA
Bacteroides stercoris ATCC 43183 BACSTE_03699 -96 7.9 ACAAATATAG-(11)-ACAAATAGGG
Bacteroides thetaiotaomicron VPI-5482 BT4675 -140 8.3 ACAAATGTGA-(11)-ACAAACGAAA
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