Propagation of HTCS_Rgu-1 regulog to Bacteroides ovatus ATCC 8483
| Source regulog: | HTCS_Rgu-1 - Bacteroidaceae |
| Regulator type: | Transcription factor |
| Regulator family: | [Other] |
| Regulation mode: | activator |
| Biological process: | Rhamnogalacturonides utilization |
| Effector: | Rhamogalacturonate oligosaccharides; Galacturonate oligosaccharides |
| Phylum: | Bacteroidetes |
| Propagated regulon: | |
| Target genome | Bacteroides ovatus ATCC 8483 |
| Orthologous TF(s) | BACOVA_04931, BACOVA_04904 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -128
Score: 9.5 Sequence: CAAAAAATACGA-(9)-CAAATATTGCAC
Locus tag: BACOVA_04911
|
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| BACOVA_04911 | -128 | 9.5 | CAAAAAATACGA-(9)-CAAATATTGCAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: susC_Rgu-1 | ||||
| Ortholog function: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides | ||||
| Bacteroides ovatus ATCC 8483 | BACOVA_04911 | -128 | 9.5 | CAAAAAATACGA-(9)-CAAATATTGCAC |
|
Position: -267
Score: 9 Sequence: CAAAAAATACAC-(9)-CAATTAGTCCAC
Locus tag: BACOVA_05040
|
||||
| BACOVA_05040 | -267 | 9 | CAAAAAATACAC-(9)-CAATTAGTCCAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pehX1 | ||||
| Ortholog function: Polygalacturonase (EC 3.2.1.15 ) | ||||
| Bacteroides cellulosilyticus DSM 14838 | BACCELL_03143 | -273 | 8.8 | CAAAAAATCCAC-(9)-CAAATTGTGCAC |
| Bacteroides eggerthii DSM 20697 | BACEGG_00876 | -272 | 9.2 | CAAAAAATACAC-(9)-CAATTAGTACAC |
| Bacteroides ovatus ATCC 8483 | BACOVA_05040 | -267 | 9 | CAAAAAATACAC-(9)-CAATTAGTCCAC |
| Bacteroides stercoris ATCC 43183 | BACSTE_03276 | -205 | 8.4 | CAAAAAATACAC-(9)-CAATTTGTACAC |
| Bacteroides thetaiotaomicron VPI-5482 | BT4187 | -265 | 9 | CAAAAAATACAC-(9)-CAATAACTCCAC |