Propagation of HTCS_Rgu-2 regulog to Bacteroides ovatus ATCC 8483
| Source regulog: | HTCS_Rgu-2 - Bacteroidaceae |
| Regulator type: | Transcription factor |
| Regulator family: | [Other] |
| Regulation mode: | activator |
| Biological process: | Rhamnogalacturonides utilization |
| Effector: | |
| Phylum: | Bacteroidetes |
| Propagated regulon: | |
| Target genome | Bacteroides ovatus ATCC 8483 |
| Orthologous TF(s) | BACOVA_04993, BACOVA_05030 |
| Regulated genes | 6 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -235
Score: 7.2 Sequence: TGAATCAGAATACA-(6)-TGTACAGTAATTAA
Locus tag: BACOVA_02709
|
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| BACOVA_02709 | -235 | 7.2 | TGAATCAGAATACA-(6)-TGTACAGTAATTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BT4163 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Bacteroides ovatus ATCC 8483 | BACOVA_02709 | -235 | 7.2 | TGAATCAGAATACA-(6)-TGTACAGTAATTAA |
| Bacteroides thetaiotaomicron VPI-5482 | BT4163 | -263 | 7.2 | GGCGGTATTTTCCA-(6)-TGTACGATTCTTCA |
|
Position: -83
Score: 8.5 Sequence: GATACAATATTCTA-(6)-TGTACATCTTTCTA
Locus tag: BACOVA_04950
|
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| BACOVA_04950 | -83 | 8.5 | GATACAATATTCTA-(6)-TGTACATCTTTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bguA | ||||
| Ortholog function: Beta-glucuronidase (EC 3.2.1.31) | ||||
| Bacteroides dorei DSM 17855 | BACDOR_00368 | -94 | 9.3 | TATACGAATTTCCA-(6)-TGTACTTCTTTCTA |
| Bacteroides ovatus ATCC 8483 | BACOVA_04950 | -141 | 8.2 | TGGACAATATTTCA-(6)-TGTAGTTTTGTACA |
| -83 | 8.5 | GATACAATATTCTA-(6)-TGTACATCTTTCTA | ||
| Bacteroides plebeius DSM 17135 | BACPLE_00503 | -96 | 8.5 | TACACAATATTCCA-(6)-TGAAGAATTATCGA |
| Bacteroides thetaiotaomicron VPI-5482 | BT4151 | -111 | 8.5 | GATACAATATTCTA-(6)-TGTACATCTTTCTA |
| Bacteroides vulgatus ATCC 8482 | BVU_0181 | -94 | 9.3 | TATACGAATTTCCA-(6)-TGTACTTCTTTCTA |
|
Position: -108
Score: 8.7 Sequence: TGTACAAAACTACA-(6)-TGAAATATTGTCCA
Locus tag: BACOVA_04951
|
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| BACOVA_04951 | -108 | 8.7 | TGTACAAAACTACA-(6)-TGAAATATTGTCCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BVU_0180 | ||||
| Ortholog function: Predicted arabinosidase, GH42 family | ||||
| Bacteroides ovatus ATCC 8483 | BACOVA_04951 | -108 | 8.7 | TGTACAAAACTACA-(6)-TGAAATATTGTCCA |
|
Position: -89
Score: 8.7 Sequence: TGAACGAATCGCCA-(6)-TGGATAATATTCTA
Locus tag: BACOVA_04967
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| BACOVA_04967 | -89 | 8.7 | TGAACGAATCGCCA-(6)-TGGATAATATTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BT4172 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Bacteroides dorei DSM 17855 | BACDOR_00396 | -108 | 8.9 | TGAACGAATAAACA-(6)-TGAATGAATTTCTA |
| Bacteroides ovatus ATCC 8483 | BACOVA_04967 | -89 | 8.7 | TGAACGAATCGCCA-(6)-TGGATAATATTCTA |
| Bacteroides plebeius DSM 17135 | BACPLE_00251 | -92 | 9.7 | TATACAAATTTACA-(6)-TGTACAATACTCCA |
| Bacteroides thetaiotaomicron VPI-5482 | BT4172 | -123 | 9.6 | TGAACAAATATCCA-(6)-TGAATGATATTCTA |
| Bacteroides vulgatus ATCC 8482 | BVU_0159 | -108 | 8.9 | TGAACGAATAAACA-(6)-TGAATGAATTTCTA |
|
Position: -93
Score: 8.3 Sequence: TGATGATTTCTACA-(6)-TGTACAATATTCTA
Locus tag: BACOVA_04974
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| BACOVA_04974 | -93 | 8.3 | TGATGATTTCTACA-(6)-TGTACAATATTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BT4175 | ||||
| Ortholog function: Predicted beta-galactosidase, PL11 family | ||||
| Bacteroides dorei DSM 17855 | BACDOR_00407 | -85 | 9.3 | TGGACGAATTTCCA-(6)-TGTATCTTATTCTA |
| Bacteroides ovatus ATCC 8483 | BACOVA_04974 | -93 | 8.3 | TGATGATTTCTACA-(6)-TGTACAATATTCTA |
| Bacteroides thetaiotaomicron VPI-5482 | BT4175 | -183 | 6.5 | TGGAATATTGTCCA-(6)-TTTAAATTTGTCCA |
| Bacteroides vulgatus ATCC 8482 | BVU_0152 | -85 | 9.3 | TGGACGAATTTCCA-(6)-TGTATCTTATTCTA |
|
Position: -113
Score: 7 Sequence: TGGAAAAAATGACA-(6)-TGGATAATAATCCT
Locus tag: BACOVA_05029
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| BACOVA_05029 | -113 | 7 | TGGAAAAAATGACA-(6)-TGGATAATAATCCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BACOVA_05029 | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacteroides ovatus ATCC 8483 | BACOVA_05029 | -113 | 7 | TGGAAAAAATGACA-(6)-TGGATAATAATCCT |