Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of BkdR regulog to Bacillus pumilus SAFR-032

Reference regulog properties
Source regulog: BkdR - Bacillales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus pumilus SAFR-032
Orthologous TF(s) BPUM_2149, BPUM_3180
Regulated genes 2
Built upon 26 sites [see more]
Predicted regulatory interactions in Bacillus pumilus SAFR-032
Locus tag Position Score Sequence
Position: -61
Score: 5.6
Sequence: TGCAATTTTTTGCA
Position: -31
Score: 4.7
Sequence: TGCAAATTTTTTCA
Locus tag: BPUM_2149
BPUM_2149 -61 5.6 TGCAATTTTTTGCA
-31 4.7 TGCAAATTTTTTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: bkdR
Ortholog function: Transcriptional regulator of isoleucine and valine utilization, Fis family
Bacillus subtilis subsp. subtilis str. 168 BSU24100 -61 5.6 TGCAAATTATTGCA
-31 4.7 TGCAAATTTTTTCA
Bacillus amyloliquefaciens FZB42 RBAM_022380 -61 5.6 TGCAAATTATTGCA
-31 4.7 TGCAAATTTTTTCA
Bacillus pumilus SAFR-032 BPUM_2149 -61 5.6 TGCAATTTTTTGCA
-31 4.7 TGCAAATTTTTTCA
Bacillus licheniformis DSM 13 BLi02587 -61 5.2 TGCAAATTGTTGCA
-31 4.7 TGCAAAATTTTTCA
Anoxybacillus flavithermus WK1 Aflv_0957 -23 5.6 TGCAAAAAATTGCA
Bacillus cereus ATCC 14579 BC4165 -41 4.7 TGAAAAAATTTGCA
Oceanobacillus iheyensis HTE831 OB1870 -27 5.2 TGCAAAATAATGCA