Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of YwbI regulog to Bacillus pumilus SAFR-032

Reference regulog properties
Source regulog: YwbI - Bacillales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode:
Biological process: Cell wall metabolism
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus pumilus SAFR-032
Orthologous TF(s) BPUM_3485
Regulated genes 2
Built upon 8 sites [see more]
Predicted regulatory interactions in Bacillus pumilus SAFR-032
Locus tag Position Score Sequence
Position: -62
Score: 6
Sequence: ATAGGTAAAATACATAT
Locus tag: BPUM_3485
BPUM_3485 -62 6 ATAGGTAAAATACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ywbI
Ortholog function: Transcriptional regulator, LysR family
Bacillus pumilus SAFR-032 BPUM_3485 -62 6 ATAGGTAAAATACATAT
Position: -120
Score: 6
Sequence: ATATGTATTTTACCTAT
Locus tag: BPUM_3486
BPUM_3486 -120 6 ATATGTATTTTACCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cidA
Ortholog function: Holin-like protein CidA
Bacillus subtilis subsp. subtilis str. 168 BSU38320 -60 5.7 ATATATATTTTACCTAT
Bacillus amyloliquefaciens FZB42 RBAM_035580 -60 6 ATATGTATTTTACCTAT
Bacillus pumilus SAFR-032 BPUM_3486 -120 6 ATATGTATTTTACCTAT
Bacillus licheniformis DSM 13 BLi04057 -62 6 ATATGTATTTTACCTAT
Paenibacillus sp. JDR-2 Pjdr2_1918 -60 5.6 AAATGTATTTTACCTAT
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