Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fnr regulog to Bacillus pumilus SAFR-032

Reference regulog properties
Source regulog: Fnr - Bacillales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Anaerobic metabolism
Effector: Oxygen
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus pumilus SAFR-032
Orthologous TF(s) No orthologous TFs found
Regulated genes 1
Built upon 39 sites [see more]
Predicted regulatory interactions in Bacillus pumilus SAFR-032
Locus tag Position Score Sequence
Position: -77
Score: 5.4
Sequence: TGTGAAGTATTGCACA
Position: -54
Score: 6
Sequence: TGTGAAATACTTCACA
Locus tag: BPUM_0277
BPUM_0277 -77 5.4 TGTGAAGTATTGCACA
-54 6 TGTGAAATACTTCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ldh
Ortholog function: L-lactate dehydrogenase (EC 1.1.1.27)
Bacillus subtilis subsp. subtilis str. 168 BSU03050 -83 4.7 TGTGAAGTGTTGCACA
-60 6 TGTGAAATACTTCACA
Bacillus amyloliquefaciens FZB42 RBAM_003290 -80 5.4 TGTGAAGTATTGCACA
-57 6 TGTGAAATACTTCACA
Bacillus pumilus SAFR-032 BPUM_0277 -77 5.4 TGTGAAGTATTGCACA
-54 6 TGTGAAATACTTCACA
Bacillus licheniformis DSM 13 BLi00366 -80 5.4 TGTGAAGTATTGCACA
-57 5.4 TGTGAAGAATTTCACA
Geobacillus kaustophilus HTA426 GK0475 -40 4.9 TGTGAATATATTCACA
Bacillus halodurans C-125 BH3937 -274 6 TGTGAAATATTTCACA
-217 6 TGTGAAATATTTCACA
-42 4.8 TGTGAAAATATTCACA
Bacillus clausii KSM-K16 ABC2872 -66 5.4 TGTGAAATAATGCACA
-43 5.4 TGTGAATAATTTCACA
Oceanobacillus iheyensis HTE831 OB3279 -66 6 TGTGAAATATTTCACA
© 2009-2020 RegPrecise