Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of PerR regulog to Bacteroides coprophilus DSM 18228

Reference regulog properties
Source regulog: PerR - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Peroxide stress response; Oxidative stress response
Effector: Hydrogen peroxide
Phylum: Bacteroidetes
Propagated regulon:
Target genome Bacteroides coprophilus DSM 18228
Orthologous TF(s) BACCOPRO_01403
Regulated genes 6
Built upon 51 sites [see more]
Predicted regulatory interactions in Bacteroides coprophilus DSM 18228
Locus tag Position Score Sequence
Position: -93
Score: 6.8
Sequence: AAAGTTGTAATGATTACAATTTT
Locus tag: BACCOPRO_00127
BACCOPRO_00127 -93 6.8 AAAGTTGTAATGATTACAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rbr2
Ortholog function: Rubrerythrin
Bacteroides coprophilus DSM 18228 BACCOPRO_00127 -93 6.8 AAAGTTGTAATGATTACAATTTT
Position: -28
Score: 5.2
Sequence: TCCTTTGTAATTATTATAAAAAT
Locus tag: BACCOPRO_00522
BACCOPRO_00522 -28 5.2 TCCTTTGTAATTATTATAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: BT1211
Ortholog function: hypothetical protein
Bacteroides cellulosilyticus DSM 14838 BACCELL_04244 -29 6.5 ATATTTGTAATGATTATAAATTT
Bacteroides dorei DSM 17855 BACDOR_04415 -34 5.9 TTCTTTGTAATTATTACAACTTT
Bacteroides eggerthii DSM 20697 BACEGG_02389 -30 6.2 ATATTTGTAATGATTATAATTTG
Bacteroides ovatus ATCC 8483 BACOVA_03967 -35 6.2 ATATTTGTACTCATTACAAATTA
Bacteroides plebeius DSM 17135 BACPLE_02813 -28 5.5 TACTTTGTAATCATTATAAAAAT
Bacteroides stercoris ATCC 43183 BACSTE_00833 -29 6.2 ATATTTGTAATGATTATAATTTG
Bacteroides thetaiotaomicron VPI-5482 BT1211 -35 6.2 ATATTTGTACTCATTACAAATTC
Bacteroides uniformis ATCC 8492 BACUNI_02171 70 6.5 ATATTTGTAATCATTATAATTTT
Bacteroides coprophilus DSM 18228 BACCOPRO_00522 -28 5.2 TCCTTTGTAATTATTATAAAAAT
Position: -79
Score: 6
Sequence: ACAATTGTTATCTTTACAATTTT
Locus tag: BACCOPRO_00708
BACCOPRO_00708 -79 6 ACAATTGTTATCTTTACAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: PF05140
Ortholog function: ResB protein required for cytochrome c biosynthesis
Bacteroides plebeius DSM 17135 BACPLE_02893 -79 5.9 AGATTTGTTATCTTTACAATTTT
Bacteroides coprophilus DSM 18228 BACCOPRO_00708 -79 6 ACAATTGTTATCTTTACAATTTT
Position: -56
Score: 6.3
Sequence: ATATTTGTAATTATTACATATCT
Locus tag: BACCOPRO_01040
BACCOPRO_01040 -56 6.3 ATATTTGTAATTATTACATATCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tpx
Ortholog function: Thiol peroxidase, Tpx-type (EC 1.11.1.15)
Bacteroides dorei DSM 17855 BACDOR_00877 -44 5.7 AAATTTGTTATCATTACAGTATC
Bacteroides uniformis ATCC 8492 BACUNI_04341 -35 5 TAATTTGTTATGTATACATATAA
Bacteroides vulgatus ATCC 8482 BVU_3944 -44 5.7 AAATTTGTTATCATTACAGTATC
Bacteroides coprophilus DSM 18228 BACCOPRO_01040 -56 6.3 ATATTTGTAATTATTACATATCT
Position: -33
Score: 6.1
Sequence: AAAATTGTAATAGTTACAGAATT
Locus tag: BACCOPRO_01403
BACCOPRO_01403 -33 6.1 AAAATTGTAATAGTTACAGAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: perR
Ortholog function: Peroxide stress regulator PerR, Fur family
Bacteroides cellulosilyticus DSM 14838 BACCELL_05678 -36 6.6 AAAAATGTAATTATTACAAGTTT
Bacteroides dorei DSM 17855 BACDOR_03683 -30 6.1 AAAATTGTAATAGTTACAAAAAG
Bacteroides eggerthii DSM 20697 BACEGG_01512 -37 6.6 AAAAATGTAATTATTACAAGTTT
Bacteroides fragilis NCTC 9343 BF3019 -39 6.8 AAAATTGTAATGAATACAATTTT
Bacteroides plebeius DSM 17135 BACPLE_02660 -33 5.9 AGAATTGTAACAATTACATAATT
Bacteroides stercoris ATCC 43183 BACSTE_01825 -37 6.6 AAAAATGTAATTATTACAAGTTT
Bacteroides uniformis ATCC 8492 BACUNI_01378 -38 6.6 AAAAATGTAATAATTACAAGTTT
Bacteroides vulgatus ATCC 8482 BVU_2366 -30 6.1 AAAATTGTAATAGTTACAAAAAG
Bacteroides coprophilus DSM 18228 BACCOPRO_01403 -33 6.1 AAAATTGTAATAGTTACAGAATT
Position: -55
Score: 6.1
Sequence: TGCATTGTAATAATTACAAATTT
Locus tag: BACCOPRO_03297
BACCOPRO_03297 -55 6.1 TGCATTGTAATAATTACAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ahpC
Ortholog function: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Bacteroides dorei DSM 17855 BACDOR_04898 -55 6 GCAAATGTAATAATTACAATTTA
Bacteroides vulgatus ATCC 8482 BVU_0847 -55 6 GCAAATGTAATAATTACAATTTA
Bacteroides coprophilus DSM 18228 BACCOPRO_03297 -55 6.1 TGCATTGTAATAATTACAAATTT
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