Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GabR regulog to Corynebacterium glutamicum ATCC 13032

Reference regulog properties
Source regulog: GabR - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode:
Biological process: Gamma-aminobutyrate utilization
Effector:
Phylum: Actinobacteria
Propagated regulon:
Target genome Corynebacterium glutamicum ATCC 13032
Orthologous TF(s) cg0565
Regulated genes 2
Built upon 9 sites [see more]
Predicted regulatory interactions in Corynebacterium glutamicum ATCC 13032
Locus tag Position Score Sequence
Position: -50
Score: 4.9
Sequence: GTTGTAGACAATATTTCGCCCAT
Locus tag: cg0565
cg0565 -50 4.9 GTTGTAGACAATATTTCGCCCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gabR
Ortholog function: Predicted transcriptional regulator of gamma-aminobutyrate utilization, COG2508 family
Corynebacterium aurimucosum ATCC 700975 cauri_0644 -138 5.5 AATGGTGAGAAATTGTCCACAAT
-44 5.2 TGGGGATAGAAATTCTGCACGAT
Corynebacterium aurimucosum ATCC 700975 cauri_0645 -44 5.4 AGGGTGTATAAATTTTGCACCTA
Corynebacterium glutamicum ATCC 13032 cg0565 -50 4.9 GTTGTAGACAATATTTCGCCCAT
Position: -113
Score: 4.9
Sequence: ATGGGCGAAATATTGTCTACAAC
Locus tag: cg0566
cg0566 -113 4.9 ATGGGCGAAATATTGTCTACAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: gabT2
Ortholog function: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Corynebacterium aurimucosum ATCC 700975 cauri_0646 -96 5.4 TAGGTGCAAAATTTATACACCCT
Corynebacterium aurimucosum ATCC 700975 cauri_0643 -207 5.2 ATCGTGCAGAATTTCTATCCCCA
-113 5.5 ATTGTGGACAATTTCTCACCATT
Corynebacterium glutamicum ATCC 13032 cg0566 -113 4.9 ATGGGCGAAATATTGTCTACAAC