Propagation of AmtR regulog to Corynebacterium glutamicum ATCC 13032
| Source regulog: | AmtR - Corynebacteriaceae |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Nitrogen metabolism |
| Effector: | GlnK-AMP, signal transduction protein |
| Phylum: | Actinobacteria |
| Propagated regulon: | |
| Target genome | Corynebacterium glutamicum ATCC 13032 |
| Orthologous TF(s) | cg0986 |
| Regulated genes | 14 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -79
Score: 5.7 Sequence: CATTTCTATCAATCTATAGAAAGT
Position: -33
Score: 6 Sequence: AGTTTCTATAGATTGATAGAAAAG
Locus tag: cg0103
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| cg0103 | -79 | 5.7 | CATTTCTATCAATCTATAGAAAGT | |
| -33 | 6 | AGTTTCTATAGATTGATAGAAAAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: crnT | ||||
| Ortholog function: Creatinine transporter | ||||
| Corynebacterium efficiens YS-314 | CE2850 | -72 | 5.3 | TAATTCTATAGATCAATAGAATTA |
| -27 | 5.7 | AGTTTCTATCACTCAATAGAAAAG | ||
| Corynebacterium glutamicum ATCC 13032 | cg0103 | -79 | 5.7 | CATTTCTATCAATCTATAGAAAGT |
| -33 | 6 | AGTTTCTATAGATTGATAGAAAAG | ||
|
Position: -60
Score: 4.9 Sequence: AATACCTGTCAAGCAATAGAATAG
Locus tag: cg0104
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| cg0104 | -60 | 4.9 | AATACCTGTCAAGCAATAGAATAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: codA | ||||
| Ortholog function: Cytosine deaminase (EC 3.5.4.1) | ||||
| Corynebacterium glutamicum ATCC 13032 | cg0104 | -60 | 4.9 | AATACCTGTCAAGCAATAGAATAG |
|
Position: -31
Score: 4.8 Sequence: AATTTCTGTTACCTGACAGAAAGG
Locus tag: cg0113
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| cg0113 | -31 | 4.8 | AATTTCTGTTACCTGACAGAAAGG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ureA | ||||
| Ortholog function: Urease, gamma subunit (EC 3.5.1.5) | ||||
| Corynebacterium efficiens YS-314 | CE0993 | -25 | 4.7 | TCTAACTATTGACTTATAGTTATT |
| Corynebacterium glutamicum ATCC 13032 | cg0113 | -31 | 4.8 | AATTTCTGTTACCTGACAGAAAGG |
|
Position: -110
Score: 5.5 Sequence: ACTTTCGATCAACCTATAGGAAAA
Locus tag: cg0228
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| cg0228 | -110 | 5.5 | ACTTTCGATCAACCTATAGGAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hkm | ||||
| Ortholog function: Predicted sensor histidine kinase of two-component system | ||||
| Corynebacterium efficiens YS-314 | CE0157 | -113 | 5.1 | GGTTTCTATTAATCATTCGATAAT |
| -46 | 5.7 | ATTTTCGATCAACCTATAGGAAAA | ||
| Corynebacterium glutamicum ATCC 13032 | cg0228 | -179 | 5.4 | TGTTTCTATCAATCGTTCGATAAT |
| -110 | 5.5 | ACTTTCGATCAACCTATAGGAAAA | ||
|
Position: -46
Score: 5.5 Sequence: ATTATCGAACGATTGATAGAAACA
Locus tag: cg0229
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| cg0229 | -46 | 5.5 | ATTATCGAACGATTGATAGAAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltB | ||||
| Ortholog function: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | ||||
| Corynebacterium efficiens YS-314 | CE0158 | -107 | 5.4 | TTTTCCTATAGGTTGATCGAAAAT |
| -40 | 5.1 | ATTATCGAATGATTAATAGAAACC | ||
| Corynebacterium glutamicum ATCC 13032 | cg0229 | -115 | 5.3 | TTTTCCTATAGGTTGATCGAAAGT |
| -46 | 5.5 | ATTATCGAACGATTGATAGAAACA | ||
|
Position: -42
Score: 5.5 Sequence: AAAAACTATAGAGCTATAGAAACT
Locus tag: cg1061
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| cg1061 | -42 | 5.5 | AAAAACTATAGAGCTATAGAAACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: urtA | ||||
| Ortholog function: Urea ABC transporter, substrate-binding protein | ||||
| Corynebacterium efficiens YS-314 | CE1000 | -65 | 5.6 | ATTACCTATAGCTTTATAGAAACA |
| -39 | 5.1 | TAAACCTGTCGATCTATAGAAATC | ||
| Corynebacterium glutamicum ATCC 13032 | cg1061 | -68 | 5.1 | ACTACCTATAGGCTGACAGAAACT |
| -42 | 5.5 | AAAAACTATAGAGCTATAGAAACT | ||
|
Position: -40
Score: 6.2 Sequence: AGTATCTATAGATTGATAGAAAAT
Locus tag: cg1295
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| cg1295 | -40 | 6.2 | AGTATCTATAGATTGATAGAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cg1295 | ||||
| Ortholog function: Predicted hydrolase/acyltransferase | ||||
| Corynebacterium glutamicum ATCC 13032 | cg1295 | -40 | 6.2 | AGTATCTATAGATTGATAGAAAAT |
|
Position: -41
Score: 6 Sequence: ATTTTCTATCAATCTATAGATACT
Locus tag: cg1296
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| cg1296 | -41 | 6 | ATTTTCTATCAATCTATAGATACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cg1296 | ||||
| Ortholog function: Predicted non-ribosomal peptide synthetase | ||||
| Corynebacterium glutamicum ATCC 13032 | cg1296 | -41 | 6 | ATTTTCTATCAATCTATAGATACT |
|
Position: -100
Score: 5.2 Sequence: GAAATCTATAGAACGATAGGTAAA
Position: -64
Score: 5.3 Sequence: TTTATCTATAGCGGAATAGAAAAT
Locus tag: cg1785
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| cg1785 | -100 | 5.2 | GAAATCTATAGAACGATAGGTAAA | |
| -64 | 5.3 | TTTATCTATAGCGGAATAGAAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: amtA | ||||
| Ortholog function: Ammonium transporter | ||||
| Corynebacterium efficiens YS-314 | CE1701 | -99 | 5.3 | TTAAACTATTGACCGATAGAAACA |
| -65 | 5.1 | GTTATCTGTTATGCAATAGAAAAT | ||
| Corynebacterium glutamicum ATCC 13032 | cg1785 | -100 | 5.2 | GAAATCTATAGAACGATAGGTAAA |
| -64 | 5.3 | TTTATCTATAGCGGAATAGAAAAT | ||
|
Position: -193
Score: 5.2 Sequence: AATATCTATCATGTGATAGGTAAA
Locus tag: cg2136
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| cg2136 | -193 | 5.2 | AATATCTATCATGTGATAGGTAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gluA | ||||
| Ortholog function: Glutamate ABC transporter, ATP-binding protein | ||||
| Corynebacterium efficiens YS-314 | CE1844 | -110 | 4.9 | TTTACCTATTGAGCTATTGATAAA |
| Corynebacterium glutamicum ATCC 13032 | cg2136 | -193 | 5.2 | AATATCTATCATGTGATAGGTAAA |
|
Position: -218
Score: 5.7 Sequence: AATTTCTATCAAACTATAGAAAGA
Locus tag: cg2181
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| cg2181 | -218 | 5.7 | AATTTCTATCAAACTATAGAAAGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cg2181 | ||||
| Ortholog function: Predicted ABC transporter, substrate-binding protein | ||||
| Corynebacterium glutamicum ATCC 13032 | cg2181 | -218 | 5.7 | AATTTCTATCAAACTATAGAAAGA |
|
Position: -183
Score: 5.4 Sequence: ATTACCTGTTAAACTATAGAAAAT
Locus tag: cg2261
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| cg2261 | -183 | 5.4 | ATTACCTGTTAAACTATAGAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: amtB | ||||
| Ortholog function: Ammonium transporter | ||||
| Corynebacterium efficiens YS-314 | CE1968 | -168 | 5.3 | GAATTCTATCGACCTATCGAAAGT |
| Corynebacterium glutamicum ATCC 13032 | cg2261 | -183 | 5.4 | ATTACCTGTTAAACTATAGAAAAT |
| -140 | 5 | CTATTCTATAGATCTATTGAAATT | ||
|
Position: -149
Score: 5.2 Sequence: AGTTTTGATAGATCGACAGGTAAT
Locus tag: cg2429
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| cg2429 | -149 | 5.2 | AGTTTTGATAGATCGACAGGTAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnA | ||||
| Ortholog function: Glutamine synthetase type I (EC 6.3.1.2) | ||||
| Corynebacterium diphtheriae NCTC 13129 | DIP1644 | -117 | 5.4 | TTTTTTGATAGCTCTATAGATAAT |
| Corynebacterium efficiens YS-314 | CE2104 | -147 | 5.5 | AGTTTTGATAGATCGACAGATAAT |
| Corynebacterium glutamicum ATCC 13032 | cg2429 | -149 | 5.2 | AGTTTTGATAGATCGACAGGTAAT |