Propagation of GabR regulog to Corynebacterium glutamicum R
| Source regulog: | GabR - Corynebacteriaceae |
| Regulator type: | Transcription factor |
| Regulator family: | [Other] |
| Regulation mode: | |
| Biological process: | Gamma-aminobutyrate utilization |
| Effector: | |
| Phylum: | Actinobacteria |
| Propagated regulon: | |
| Target genome | Corynebacterium glutamicum R |
| Orthologous TF(s) | cgR_0581 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -50
Score: 4.9 Sequence: GTTGTAGACAATATTTCGCCCAT
Locus tag: cgR_0581
|
||||
| cgR_0581 | -50 | 4.9 | GTTGTAGACAATATTTCGCCCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gabR | ||||
| Ortholog function: Predicted transcriptional regulator of gamma-aminobutyrate utilization, COG2508 family | ||||
| Corynebacterium aurimucosum ATCC 700975 | cauri_0644 | -138 | 5.5 | AATGGTGAGAAATTGTCCACAAT |
| -44 | 5.2 | TGGGGATAGAAATTCTGCACGAT | ||
| Corynebacterium aurimucosum ATCC 700975 | cauri_0645 | -44 | 5.4 | AGGGTGTATAAATTTTGCACCTA |
| Corynebacterium glutamicum ATCC 13032 | cg0565 | -50 | 4.9 | GTTGTAGACAATATTTCGCCCAT |
|
Position: -113
Score: 4.9 Sequence: ATGGGCGAAATATTGTCTACAAC
Locus tag: cgR_0582
|
||||
| cgR_0582 | -113 | 4.9 | ATGGGCGAAATATTGTCTACAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gabT2 | ||||
| Ortholog function: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | ||||
| Corynebacterium aurimucosum ATCC 700975 | cauri_0646 | -96 | 5.4 | TAGGTGCAAAATTTATACACCCT |
| Corynebacterium aurimucosum ATCC 700975 | cauri_0643 | -207 | 5.2 | ATCGTGCAGAATTTCTATCCCCA |
| -113 | 5.5 | ATTGTGGACAATTTCTCACCATT | ||
| Corynebacterium glutamicum ATCC 13032 | cg0566 | -113 | 4.9 | ATGGGCGAAATATTGTCTACAAC |