Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Rex regulog to Bacillus pumilus SAFR-032

Reference regulog properties
Source regulog: Rex - Bacillales
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus pumilus SAFR-032
Orthologous TF(s) BPUM_0528
Regulated genes 3
Built upon 64 sites [see more]
Predicted regulatory interactions in Bacillus pumilus SAFR-032
Locus tag Position Score Sequence
Position: -79
Score: 6.3
Sequence: TTTGTGAAGTATTGCACAAT
Position: -56
Score: 5.7
Sequence: AATGTGAAATACTTCACATA
Locus tag: BPUM_0277
BPUM_0277 -79 6.3 TTTGTGAAGTATTGCACAAT
-56 5.7 AATGTGAAATACTTCACATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ldh
Ortholog function: L-lactate dehydrogenase (EC 1.1.1.27)
Bacillus subtilis subsp. subtilis str. 168 BSU03050 -85 6 TTTGTGAAGTGTTGCACAAT
-62 6 AATGTGAAATACTTCACAAA
Bacillus amyloliquefaciens FZB42 RBAM_003290 -82 6.3 TTTGTGAAGTATTGCACAAT
-59 5.6 AATGTGAAATACTTCACAAG
Bacillus pumilus SAFR-032 BPUM_0277 -79 6.3 TTTGTGAAGTATTGCACAAT
-56 5.7 AATGTGAAATACTTCACATA
Bacillus licheniformis DSM 13 BLi00366 -82 6 TATGTGAAGTATTGCACAAT
-59 5.8 AATGTGAAGAATTTCACAAA
Anoxybacillus flavithermus WK1 Aflv_0889 -58 5.4 TTTGTGAAACAGTGTACAAT
Geobacillus kaustophilus HTA426 GK0475 -42 5.5 AATGTGAATATATTCACAAA
Bacillus halodurans C-125 BH3937 -276 6.2 AATGTGAAATATTTCACAAA
-219 5.7 CATGTGAAATATTTCACAAA
-44 5.1 CATGTGAAAATATTCACAAA
Bacillus clausii KSM-K16 ABC2872 -68 6.4 TTTGTGAAATAATGCACAAT
-45 5.9 AATGTGAATAATTTCACAAA
Oceanobacillus iheyensis HTE831 OB3279 -68 6.5 TTTGTGAAATATTTCACAAT
Position: -35
Score: 5.5
Sequence: TATGTGAAACAATTCACATA
Locus tag: BPUM_1837
BPUM_1837 -35 5.5 TATGTGAAACAATTCACATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yndG
Ortholog function: Hypothetical protein
Bacillus pumilus SAFR-032 BPUM_1837 -35 5.5 TATGTGAAACAATTCACATA
Bacillus licheniformis DSM 13 BLi02193 -32 5.8 ATTGTGAATATATTCACAAA
Bacillus cereus ATCC 14579 BC1749 -71 5 TTTGTGAAAAATGTAGCAAA
Position: -98
Score: 5.6
Sequence: TTTGTGAACCATTGAACAAA
Locus tag: BPUM_3519
BPUM_3519 -98 5.6 TTTGTGAACCATTGAACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cydA
Ortholog function: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
Bacillus subtilis subsp. subtilis str. 168 BSU38760 -120 5.8 TTTGTGAAATATTGAGCAAT
-85 5.3 TTTGTGAATTACTGATCAAA
-53 5.4 TTTGTGAAGTAGTGAGCAAA
Bacillus amyloliquefaciens FZB42 RBAM_036010 -106 5.5 TTTGTGAAACATTGAGCAAA
-76 5 TTTGTGAAATACCGAGCAAT
-44 5.5 TTTGTGAAATGTTGAGCAAT
Bacillus pumilus SAFR-032 BPUM_3519 -98 5.6 TTTGTGAACCATTGAACAAA
-68 4.8 TTTGTGAAGTGGTGAGCATA
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