Propagation of PcaR regulog to Corynebacterium efficiens YS-314
| Source regulog: | PcaR - Corynebacteriaceae |
| Regulator type: | Transcription factor |
| Regulator family: | IclR |
| Regulation mode: | repressor |
| Biological process: | Protocatechuate degradation |
| Effector: | |
| Phylum: | Actinobacteria |
| Propagated regulon: | |
| Target genome | Corynebacterium efficiens YS-314 |
| Orthologous TF(s) | CE2294 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -186
Score: 5.9 Sequence: GTTCACTCTGCGAAC
Locus tag: CE1133
|
||||
| CE1133 | -186 | 5.9 | GTTCACTCTGCGAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pobA | ||||
| Ortholog function: Hydroxybenzoate hydroxylase (EC 1.14.13.2) | ||||
| Corynebacterium efficiens YS-314 | CE1133 | -186 | 5.9 | GTTCACTCTGCGAAC |
| Corynebacterium glutamicum ATCC 13032 | cg1226 | -119 | 5.8 | GTTCGCAAGGCGAAC |
|
Position: 10
Score: 5.9 Sequence: GTTCGCTGAGCGAAC
Locus tag: CE2294
|
||||
| CE2294 | 10 | 5.9 | GTTCGCTGAGCGAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pcaR | ||||
| Ortholog function: Protocoatechuate utilization transription regulator PcaR, IclR family | ||||
| Corynebacterium efficiens YS-314 | CE2294 | 10 | 5.9 | GTTCGCTGAGCGAAC |
| Corynebacterium glutamicum ATCC 13032 | cg2624 | -34 | 6.1 | GTTCGCAATGCGAAC |
|
Position: -82
Score: 5.9 Sequence: GTCCGCTCTGCGAAC
Locus tag: CE2301
|
||||
| CE2301 | -82 | 5.9 | GTCCGCTCTGCGAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pcaH | ||||
| Ortholog function: Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) | ||||
| Corynebacterium efficiens YS-314 | CE2301 | -82 | 5.9 | GTCCGCTCTGCGAAC |
| Corynebacterium glutamicum ATCC 13032 | cg2631 | -81 | 5.7 | GTTCGCCCCGCGAAC |