Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RosR regulog to Corynebacterium efficiens YS-314

Reference regulog properties
Source regulog: RosR - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: MarR
Regulation mode: repressor
Biological process: Peroxide stress response
Effector: Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+)
Phylum: Actinobacteria
Propagated regulon:
Target genome Corynebacterium efficiens YS-314
Orthologous TF(s) CE1273
Regulated genes 8
Built upon 43 sites [see more]
Predicted regulatory interactions in Corynebacterium efficiens YS-314
Locus tag Position Score Sequence
Position: 9
Score: 5.7
Sequence: TTGTTGACGCATCATCAA
Locus tag: CE1272
CE1272 9 5.7 TTGTTGACGCATCATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg1322
Ortholog function: Predicted polyisoprenoid-binding protein
Corynebacterium amycolatum SK46 CORAM0001_1635 -118 5.5 TTGTTGACACATCACCAC
-89 5.8 TTGTTGACACGTCAACAC
Corynebacterium aurimucosum ATCC 700975 cauri_2527 -49 5.7 TTGTTGTCACGTCAACAA
Corynebacterium diphtheriae NCTC 13129 DIP1027 -147 5.1 TTGTTGACACGTCAATTG
Corynebacterium efficiens YS-314 CE1272 9 5.7 TTGTTGACGCATCATCAA
Corynebacterium glutamicum ATCC 13032 cg1322 -127 6 TTGTTGACACATCATCAA
Position: -43
Score: 6.1
Sequence: TTGATGATATATCAACAA
Locus tag: CE1758
CE1758 -43 6.1 TTGATGATATATCAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ywcH
Ortholog function: Predicted monooxygenase
Corynebacterium aurimucosum ATCC 700975 cauri_1400 -30 5.3 TTGTTGACACGTCACAGA
Corynebacterium diphtheriae NCTC 13129 DIP1436 -66 5.8 TTGTTGATATGTCATATA
Corynebacterium efficiens YS-314 CE1758 -43 6.1 TTGATGATATATCAACAA
Corynebacterium glutamicum ATCC 13032 cg1848 -72 5 TTGTTGACGCATCCATTA
-42 6.1 TTGGTGACATATCAACAA
Corynebacterium kroppenstedtii DSM 44385 ckrop_1424 -54 5.6 TTGTTGATATGTCATGTA
Corynebacterium urealyticum DSM 7109 cur_1546 -39 4.8 TAGGTGACATGTCACGTA
Position: -56
Score: 6
Sequence: TTGTTGATATATCCACAA
Locus tag: CE2021
CE2021 -56 6 TTGTTGATATATCCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg2329
Ortholog function: putative oxidoreductase
Corynebacterium efficiens YS-314 CE2021 -56 6 TTGTTGATATATCCACAA
Corynebacterium glutamicum ATCC 13032 cg2329 -57 5.9 TTGTTGATATATCTACAA
Position: -8
Score: 5.9
Sequence: TTGTTGACATGACAACAA
Locus tag: CE2614
CE2614 -8 5.9 TTGTTGACATGACAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg3084
Ortholog function: oxidoreductase
Corynebacterium efficiens YS-314 CE2614 -8 5.9 TTGTTGACATGACAACAA
Corynebacterium glutamicum ATCC 13032 cg3084 -8 6.4 TTGTTGATATGTCAACAA
Position: -127
Score: 5.3
Sequence: TTGTTGATAAAGCAACGA
Locus tag: CE2764
CE2764 -127 5.3 TTGTTGATAAAGCAACGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: msrA
Ortholog function: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
Corynebacterium efficiens YS-314 CE2764 -127 5.3 TTGTTGATAAAGCAACGA
Corynebacterium glutamicum ATCC 13032 cg3236 -133 5.3 TTGTTGATATTGCAACGA
Position: -98
Score: 5.1
Sequence: TCGTTGCTTTATCAACAA
Locus tag: CE2765
CE2765 -98 5.1 TCGTTGCTTTATCAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: Superoxide dismutase (EC 1.15.1.1)
Corynebacterium efficiens YS-314 CE2765 -98 5.1 TCGTTGCTTTATCAACAA
Corynebacterium glutamicum ATCC 13032 cg3237 -131 5.2 TCGTTGCAATATCAACAA
© 2009-2020 RegPrecise