Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of GenR regulog to Corynebacterium efficiens YS-314

Reference regulog properties
Source regulog: GenR - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: IclR
Regulation mode: activator (repressor)
Biological process: 3-hydroxybenzoate degradation
Effector: Gentisate; 3-hydroxybenzoate
Phylum: Actinobacteria
Propagated regulon:
Target genome Corynebacterium efficiens YS-314
Orthologous TF(s) CE2861
Regulated genes 2
Built upon 6 sites [see more]
Predicted regulatory interactions in Corynebacterium efficiens YS-314
Locus tag Position Score Sequence
Position: -102
Score: 5.7
Sequence: ATTTCCGCATAGCGGAAAC
Locus tag: CE2860
CE2860 -102 5.7 ATTTCCGCATAGCGGAAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: genD
Ortholog function: Gentisate 1,2-dioxygenase (EC 1.13.11.4)
Corynebacterium efficiens YS-314 CE2860 -102 5.7 ATTTCCGCATAGCGGAAAC
Corynebacterium glutamicum ATCC 13032 cg3351 -166 6.1 GATTCCACATAGCGGAATT
Position: -11
Score: 5.6
Sequence: GATTCCTCTATGTGGAAAG
Locus tag: CE2861
CE2861 -11 5.6 GATTCCTCTATGTGGAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: genR
Ortholog function: 3-hydroxybenzoate degradation transcriptional regulator, IclR family
Corynebacterium efficiens YS-314 CE2861 -11 5.6 GATTCCTCTATGTGGAAAG
Corynebacterium glutamicum ATCC 13032 cg3352 -26 5.4 GATTCCGCTATCTGGAAAG
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