Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of HrcA regulog to Corynebacterium efficiens YS-314

Reference regulog properties
Source regulog: HrcA - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: HrcA
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Phylum: Actinobacteria
Propagated regulon:
Target genome Corynebacterium efficiens YS-314
Orthologous TF(s) CE2190
Regulated genes 2
Built upon 25 sites [see more]
Predicted regulatory interactions in Corynebacterium efficiens YS-314
Locus tag Position Score Sequence
Position: -134
Score: 5.3
Sequence: TTAGCACCCTTAGCGGTTGAGTGCTGG
Locus tag: CE0601
CE0601 -134 5.3 TTAGCACCCTTAGCGGTTGAGTGCTGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: groS
Ortholog function: Heat shock protein 60 family co-chaperone GroES
Corynebacterium amycolatum SK46 CORAM0001_0268 -154 6 TTAGCGCTCACTATGGTTGAGTGTTAG
-131 5.8 TTAGCACTTGCAGGGGTAGAGTGCTAA
Corynebacterium aurimucosum ATCC 700975 cauri_0474 -144 5.5 CTAGCAGTCGCGAGGGTAGAGTGCTAG
Corynebacterium diphtheriae NCTC 13129 DIP0575 -124 5.2 CTGGCACTCTCAGGGGTAGAGTGCCAG
Corynebacterium efficiens YS-314 CE0601 -134 5.3 TTAGCACCCTTAGCGGTTGAGTGCTGG
Corynebacterium glutamicum ATCC 13032 cg0690 -147 5.9 TTAGCACCCTCAACAGTTGAGTGCTGG
Corynebacterium jeikeium K411 jk1729 -145 5.7 TTAGCACTTGCGAGGGTAGAGTGCCAG
Corynebacterium kroppenstedtii DSM 44385 ckrop_1737 -152 5.2 TTAGCACTCCCGGTGGTTGAGAGCTGG
-129 5.7 CTGGCACTCACACGGGTAGAGTGCCAA
Corynebacterium urealyticum DSM 7109 cur_0393 -11 5.3 TTAGCACTTGGGTGGGTAGAGTGCTAG
Position: -182
Score: 6.7
Sequence: CTTGCACTCGACATGGGCGAGTGCTAG
Position: -148
Score: 5.7
Sequence: TTAGCACTTACCTCGTATGAGTGCCAG
Locus tag: CE2561
CE2561 -182 6.7 CTTGCACTCGACATGGGCGAGTGCTAG
-148 5.7 TTAGCACTTACCTCGTATGAGTGCCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: groL2
Ortholog function: Heat shock protein 60 family chaperone GroEL
Corynebacterium amycolatum SK46 CORAM0001_1328 -249 6.2 CTTGCACTCGATGGGGTTGAGTGCTAG
-213 7.2 TTAGCACTTGCTCTAATTGAGTGCTAA
Corynebacterium aurimucosum ATCC 700975 cauri_2263 -184 5.1 CTTGCAGTCGGTAGGCCTGAGTGCCAG
-149 5.2 CTAGCACTTCCACATGGCAAGTGCCAG
Corynebacterium diphtheriae NCTC 13129 DIP2020 -218 6 CTTGCACTCGTACCCGTAGACTGCTAA
-184 7.1 TTAGCACTCGATCTAACCGAGTGCTAA
Corynebacterium efficiens YS-314 CE2561 -182 6.7 CTTGCACTCGACATGGGCGAGTGCTAG
-148 5.7 TTAGCACTTACCTCGTATGAGTGCCAG
Corynebacterium glutamicum ATCC 13032 cg3011 -183 7 CTTGCACTCACACCCCTTGAGTGCTAG
-148 5.2 TTAGCACTCAACTAATCAGAGTGCCAA
Corynebacterium jeikeium K411 jk0267 -181 5 CTTGCAGTCGATGGGGGAGAGTGCTAA
-146 6 TTAGCACTTGAAGTAAGGGAGTGCCAG
Corynebacterium kroppenstedtii DSM 44385 ckrop_1667 -184 5.4 CTTGCACTCTAAGCCCGAGACTGCTAA
Corynebacterium urealyticum DSM 7109 cur_1716 -183 5.2 CTTGCACTCAAGGGGTGCGAGTGCTAA
-148 7 TTAGCACTTGCACTGGTTGAGTGCCAG
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