Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of BioQ regulog to Corynebacterium efficiens YS-314

Reference regulog properties
Source regulog: BioQ - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Phylum: Actinobacteria
Propagated regulon:
Target genome Corynebacterium efficiens YS-314
Orthologous TF(s) CE2009
Regulated genes 2
Built upon 24 sites [see more]
Predicted regulatory interactions in Corynebacterium efficiens YS-314
Locus tag Position Score Sequence
Position: -38
Score: 6.1
Sequence: ATTGAACACTGTTCAAT
Locus tag: CE0089
CE0089 -38 6.1 ATTGAACACTGTTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioB
Ortholog function: Biotin synthase (EC 2.8.1.6)
Corynebacterium aurimucosum ATCC 700975 cauri_0069 -30 6 CTTGAACGGTGTTCAAG
Corynebacterium diphtheriae NCTC 13129 DIP1124 -24 5.4 ATTGAAAGGTGTTCAAT
Corynebacterium diphtheriae NCTC 13129 DIP0105 -15 5.6 ATTAAACACCGTTCAAT
Corynebacterium efficiens YS-314 CE0089 -38 6.1 ATTGAACACTGTTCAAT
Corynebacterium glutamicum ATCC 13032 cg0095 -156 5.1 TTTGAACAGTGTTCAAA
-135 6.1 CTTGAACACTGTTCAAG
Corynebacterium jeikeium K411 jk0682 -76 5.4 ACTAAACAGCGTTCAAG
Corynebacterium kroppenstedtii DSM 44385 ckrop_0784 -87 6 ATTGAACAGTGTTCAGG
Position: 2
Score: 5.6
Sequence: GTTGAACGGTGTTCAGT
Locus tag: CE1851
CE1851 2 5.6 GTTGAACGGTGTTCAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioY
Ortholog function: Substrate-specific component BioY of biotin ECF transporter
Corynebacterium amycolatum SK46 CORAM0001_0836 -30 5 CCTGAACAGTGCTCAAC
Corynebacterium aurimucosum ATCC 700975 cauri_1503 3 5.6 CTTGAACAGTGTTCAAA
Corynebacterium efficiens YS-314 CE1851 -30 4.6 GTTTAACACCGTTCAAA
2 5.6 GTTGAACGGTGTTCAGT
Corynebacterium glutamicum ATCC 13032 cg2147 -63 5 CATGAACGCTGTTCAAA
-31 5.6 GTTGAACACTGTTCAGG
Corynebacterium jeikeium K411 jk1118 -39 6.1 ATTGAACAGTGTTCAAG