Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CadR regulog to Corynebacterium amycolatum SK46

Reference regulog properties
Source regulog: CadR - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: ArsR
Regulation mode: repressor
Biological process: Cadmium resistance
Effector: Cadmium, ion (Cd2+)
Phylum: Actinobacteria
Propagated regulon:
Target genome Corynebacterium amycolatum SK46
Orthologous TF(s) CORAM0001_0475
Regulated genes 1
Built upon 18 sites [see more]
Predicted regulatory interactions in Corynebacterium amycolatum SK46
Locus tag Position Score Sequence
Position: -8
Score: 6
Sequence: TTCAGCACATGCTGAC
Locus tag: CORAM0001_0475
CORAM0001_0475 -8 6 TTCAGCACATGCTGAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: cadR
Ortholog function: Predicted cadmium resistance transcriptional regulator CdrR, ArsR family
Corynebacterium amycolatum SK46 CORAM0001_0475 -46 4.7 TTCAGCGCGCGTTGAA
-27 5.5 TTCAGCAATTGCTGTA
-8 6 TTCAGCACATGCTGAC
Corynebacterium aurimucosum ATCC 700975 cauri_2487 -46 4.5 TTCAGTGCATTTTGAA
-27 5.3 TTCAGCGCACGTTGTA
-8 5.7 TTCAGTACATGCTGAC
Corynebacterium jeikeium K411 jk1437 -46 4.8 TTCAGCGCATTTTGAA
-27 5.5 TTCAGCACACGATGTA
-8 6 TTCAGCACATGCTGAC
Corynebacterium urealyticum DSM 7109 cur_0636 -46 4.6 TTCAGTGCGTGTTGAA
-27 4.9 TTCAGTGGATACTGTA
-8 6 TTCAGCACATGCTGAC