Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of RosR regulog to Corynebacterium amycolatum SK46

Reference regulog properties
Source regulog: RosR - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: MarR
Regulation mode: repressor
Biological process: Peroxide stress response
Effector: Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+)
Phylum: Actinobacteria
Propagated regulon:
Target genome Corynebacterium amycolatum SK46
Orthologous TF(s) CORAM0001_0627
Regulated genes 3
Built upon 43 sites [see more]
Predicted regulatory interactions in Corynebacterium amycolatum SK46
Locus tag Position Score Sequence
Position: -38
Score: 4.3
Sequence: ATGTTGACGTAGCGACTA
Locus tag: CORAM0001_0264
CORAM0001_0264 -38 4.3 ATGTTGACGTAGCGACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: poxB
Ortholog function: Pyruvate oxidase (EC 1.2.2.2)
Corynebacterium amycolatum SK46 CORAM0001_0264 -38 4.3 ATGTTGACGTAGCGACTA
Corynebacterium aurimucosum ATCC 700975 cauri_2195 -116 4 TTGTTGTTAAAGTCACAA
Corynebacterium diphtheriae NCTC 13129 DIP1952 -395 3.6 TTGAGGTCATATCCACGT
Corynebacterium jeikeium K411 jk0715 -8 3.7 TTGGAGGCATGGCTAAAA
Corynebacterium kroppenstedtii DSM 44385 ckrop_0693 -202 5.3 TAGTTGATGTATCATAAA
Position: 4
Score: 5.2
Sequence: TTGGTGGCATGACAACAA
Locus tag: CORAM0001_1019
CORAM0001_1019 4 5.2 TTGGTGGCATGACAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqjG
Ortholog function: Glutathione S-transferase domain protein
Corynebacterium amycolatum SK46 CORAM0001_1019 4 5.2 TTGGTGGCATGACAACAA
Corynebacterium aurimucosum ATCC 700975 cauri_0351 -42 5.7 TTGTTGACGTATCAAATA
Corynebacterium diphtheriae NCTC 13129 DIP1093 19 5.5 TTGTTGATATGTCCACAC
Corynebacterium efficiens YS-314 CE1359 37 5.6 TTGTTGACATATCACATA
Corynebacterium glutamicum ATCC 13032 cg1426 -43 6 TTGTTGACATATCATCTA
Corynebacterium urealyticum DSM 7109 cur_0747 -87 5.4 TTGGTGACATATCATCCA
Position: -118
Score: 5.5
Sequence: TTGTTGACACATCACCAC
Position: -89
Score: 5.8
Sequence: TTGTTGACACGTCAACAC
Locus tag: CORAM0001_1635
CORAM0001_1635 -118 5.5 TTGTTGACACATCACCAC
-89 5.8 TTGTTGACACGTCAACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg1322
Ortholog function: Predicted polyisoprenoid-binding protein
Corynebacterium amycolatum SK46 CORAM0001_1635 -118 5.5 TTGTTGACACATCACCAC
-89 5.8 TTGTTGACACGTCAACAC
Corynebacterium aurimucosum ATCC 700975 cauri_2527 -49 5.7 TTGTTGTCACGTCAACAA
Corynebacterium diphtheriae NCTC 13129 DIP1027 -147 5.1 TTGTTGACACGTCAATTG
Corynebacterium efficiens YS-314 CE1272 9 5.7 TTGTTGACGCATCATCAA
Corynebacterium glutamicum ATCC 13032 cg1322 -127 6 TTGTTGACACATCATCAA
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