Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Zur regulog to Corynebacterium amycolatum SK46

Reference regulog properties
Source regulog: Zur - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Actinobacteria
Propagated regulon:
Target genome Corynebacterium amycolatum SK46
Orthologous TF(s) CORAM0001_1534
Regulated genes 3
Built upon 38 sites [see more]
Predicted regulatory interactions in Corynebacterium amycolatum SK46
Locus tag Position Score Sequence
Position: -36
Score: 5.4
Sequence: TATTGATAAGCATTTTCAGTA
Locus tag: CORAM0001_0703
CORAM0001_0703 -36 5.4 TATTGATAAGCATTTTCAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciC
Ortholog function: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Corynebacterium amycolatum SK46 CORAM0001_0703 -36 5.4 TATTGATAAGCATTTTCAGTA
Corynebacterium aurimucosum ATCC 700975 cauri_0148 -25 6 TGATGAAAACCGTTATCATTA
Corynebacterium diphtheriae NCTC 13129 DIP1486 -25 5.1 AAGTGAAAACGGTATCCATTA
Corynebacterium glutamicum ATCC 13032 cg0794 -79 6.1 TATTGAAAACAATTTCCATTA
-34 5.3 TATTGAAAATGATTCCCAAAA
Corynebacterium jeikeium K411 jk1292 -40 5.2 TGATGAAAACAGGTTGCAATA
Corynebacterium kroppenstedtii DSM 44385 ckrop_1235 -164 5.1 TATTGACATTGTGTATCATTA
Position: -143
Score: 4.4
Sequence: GGTTGAAAATGCTTGTCGTTA
Locus tag: CORAM0001_0534
CORAM0001_0534 -143 4.4 GGTTGAAAATGCTTGTCGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mntA
Ortholog function: putative manganese ABC transporter, substrate-binding protein
Corynebacterium amycolatum SK46 CORAM0001_0534 -143 4.4 GGTTGAAAATGCTTGTCGTTA
Corynebacterium glutamicum ATCC 13032 cg0041 -40 5.3 TATTGACAAAGAGTGCCATTA
4 5.3 TACTGAAAGACATTTTCAATA
Corynebacterium urealyticum DSM 7109 cur_1147 -128 5.3 TAATGGAAAACAGTGCCATTA
Position: -85
Score: 5.4
Sequence: AAAGGACAACTGTTTTCAATA
Locus tag: CORAM0001_1250
CORAM0001_1250 -85 5.4 AAAGGACAACTGTTTTCAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuA
Ortholog function: Zinc ABC transporter, periplasmic-binding protein ZnuA
Corynebacterium amycolatum SK46 CORAM0001_1250 -85 5.4 AAAGGACAACTGTTTTCAATA
Corynebacterium aurimucosum ATCC 700975 cauri_2206 -39 5.1 ATTTGACAACAATTTTCACTA
Corynebacterium efficiens YS-314 CE2512 1 5.8 TGTTGACAATCGTTTCCAATA
Corynebacterium glutamicum ATCC 13032 cg2911 -38 5.4 TGTTGACATCCTTTTTCAATA
Corynebacterium jeikeium K411 jk0328 40 5 TgAaGAAAATGgTTgcCAaTt
Corynebacterium kroppenstedtii DSM 44385 ckrop_0347 -38 5.1 AATTGACATCATATTTCATTA
Corynebacterium urealyticum DSM 7109 cur_1662 -43 5.1 TATTGCAATCTGTTCCCATTA
© 2009-2020 RegPrecise