Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of BioQ regulog to Corynebacterium amycolatum SK46

Reference regulog properties
Source regulog: BioQ - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Phylum: Actinobacteria
Propagated regulon:
Target genome Corynebacterium amycolatum SK46
Orthologous TF(s) CORAM0001_1067
Regulated genes 3
Built upon 24 sites [see more]
Predicted regulatory interactions in Corynebacterium amycolatum SK46
Locus tag Position Score Sequence
Position: -30
Score: 5
Sequence: CCTGAACAGTGCTCAAC
Locus tag: CORAM0001_0836
CORAM0001_0836 -30 5 CCTGAACAGTGCTCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioY
Ortholog function: Substrate-specific component BioY of biotin ECF transporter
Corynebacterium amycolatum SK46 CORAM0001_0836 -30 5 CCTGAACAGTGCTCAAC
Corynebacterium aurimucosum ATCC 700975 cauri_1503 3 5.6 CTTGAACAGTGTTCAAA
Corynebacterium efficiens YS-314 CE1851 -30 4.6 GTTTAACACCGTTCAAA
2 5.6 GTTGAACGGTGTTCAGT
Corynebacterium glutamicum ATCC 13032 cg2147 -63 5 CATGAACGCTGTTCAAA
-31 5.6 GTTGAACACTGTTCAGG
Corynebacterium jeikeium K411 jk1118 -39 6.1 ATTGAACAGTGTTCAAG
Position: -47
Score: 5.5
Sequence: CTTGAACAGTGTTAAAG
Locus tag: CORAM0001_0217
CORAM0001_0217 -47 5.5 CTTGAACAGTGTTAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioWF
Ortholog function: 8-amino-7-oxononanoate synthase (EC 2.3.1.47) / Pimeloyl-CoA synthase (EC 6.2.1.14)
Corynebacterium amycolatum SK46 CORAM0001_0217 -47 5.5 CTTGAACAGTGTTAAAG
Corynebacterium diphtheriae NCTC 13129 DIP1382 -20 5.4 ATTGAACACTGTTTAAC
Position: -50
Score: 4.7
Sequence: CCCGAACGTCGTTCAAG
Locus tag: CORAM0001_1898
CORAM0001_1898 -50 4.7 CCCGAACGTCGTTCAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioA
Ortholog function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
Corynebacterium amycolatum SK46 CORAM0001_1898 -50 4.7 CCCGAACGTCGTTCAAG
Corynebacterium diphtheriae NCTC 13129 DIP1191 -103 6 ATTGAACGCTGTTCAAT
-26 5.6 ATTAAACGGTGTTCAAT
Corynebacterium efficiens YS-314 CE1421 -303 5.7 GTTGAACGGTGTTCAAT
-224 6.1 ATTGAACACTGTTCAAT
Corynebacterium glutamicum ATCC 13032 cg2885 -65 6.1 ATTGAACACTGTTCAAT
Corynebacterium kroppenstedtii DSM 44385 ckrop_0861 -29 5.8 ACTGAACACTGTTCAGT
© 2009-2020 RegPrecise