Propagation of BioQ regulog to Corynebacterium amycolatum SK46
| Source regulog: | BioQ - Corynebacteriaceae |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Biotin biosynthesis |
| Effector: | Biotin |
| Phylum: | Actinobacteria |
| Propagated regulon: | |
| Target genome | Corynebacterium amycolatum SK46 |
| Orthologous TF(s) | CORAM0001_1067 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -30
Score: 5 Sequence: CCTGAACAGTGCTCAAC
Locus tag: CORAM0001_0836
|
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| CORAM0001_0836 | -30 | 5 | CCTGAACAGTGCTCAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bioY | ||||
| Ortholog function: Substrate-specific component BioY of biotin ECF transporter | ||||
| Corynebacterium amycolatum SK46 | CORAM0001_0836 | -30 | 5 | CCTGAACAGTGCTCAAC |
| Corynebacterium aurimucosum ATCC 700975 | cauri_1503 | 3 | 5.6 | CTTGAACAGTGTTCAAA |
| Corynebacterium efficiens YS-314 | CE1851 | -30 | 4.6 | GTTTAACACCGTTCAAA |
| 2 | 5.6 | GTTGAACGGTGTTCAGT | ||
| Corynebacterium glutamicum ATCC 13032 | cg2147 | -63 | 5 | CATGAACGCTGTTCAAA |
| -31 | 5.6 | GTTGAACACTGTTCAGG | ||
| Corynebacterium jeikeium K411 | jk1118 | -39 | 6.1 | ATTGAACAGTGTTCAAG |
|
Position: -47
Score: 5.5 Sequence: CTTGAACAGTGTTAAAG
Locus tag: CORAM0001_0217
|
||||
| CORAM0001_0217 | -47 | 5.5 | CTTGAACAGTGTTAAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bioWF | ||||
| Ortholog function: 8-amino-7-oxononanoate synthase (EC 2.3.1.47) / Pimeloyl-CoA synthase (EC 6.2.1.14) | ||||
| Corynebacterium amycolatum SK46 | CORAM0001_0217 | -47 | 5.5 | CTTGAACAGTGTTAAAG |
| Corynebacterium diphtheriae NCTC 13129 | DIP1382 | -20 | 5.4 | ATTGAACACTGTTTAAC |
|
Position: -50
Score: 4.7 Sequence: CCCGAACGTCGTTCAAG
Locus tag: CORAM0001_1898
|
||||
| CORAM0001_1898 | -50 | 4.7 | CCCGAACGTCGTTCAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bioA | ||||
| Ortholog function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) | ||||
| Corynebacterium amycolatum SK46 | CORAM0001_1898 | -50 | 4.7 | CCCGAACGTCGTTCAAG |
| Corynebacterium diphtheriae NCTC 13129 | DIP1191 | -103 | 6 | ATTGAACGCTGTTCAAT |
| -26 | 5.6 | ATTAAACGGTGTTCAAT | ||
| Corynebacterium efficiens YS-314 | CE1421 | -303 | 5.7 | GTTGAACGGTGTTCAAT |
| -224 | 6.1 | ATTGAACACTGTTCAAT | ||
| Corynebacterium glutamicum ATCC 13032 | cg2885 | -65 | 6.1 | ATTGAACACTGTTCAAT |
| Corynebacterium kroppenstedtii DSM 44385 | ckrop_0861 | -29 | 5.8 | ACTGAACACTGTTCAGT |