Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of ClgR regulog to Corynebacterium kroppenstedtii DSM 44385

Reference regulog properties
Source regulog: ClgR - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: XRE
Regulation mode: activator
Biological process: Proteolysis
Effector: DNA damage
Phylum: Actinobacteria
Propagated regulon:
Target genome Corynebacterium kroppenstedtii DSM 44385
Orthologous TF(s) ckrop_1118
Regulated genes 3
Built upon 39 sites [see more]
Predicted regulatory interactions in Corynebacterium kroppenstedtii DSM 44385
Locus tag Position Score Sequence
Position: -274
Score: 5.7
Sequence: GTTCGCTCCCGGCGTAC
Locus tag: ckrop_0337
ckrop_0337 -274 5.7 GTTCGCTCCCGGCGTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: clpC
Ortholog function: Clp protease
Corynebacterium amycolatum SK46 CORAM0001_1267 -111 5.5 GTTCGCTACTGGCGTAC
Corynebacterium aurimucosum ATCC 700975 cauri_2229 -133 5.7 GTTCGCTACCGGCGTAC
Corynebacterium diphtheriae NCTC 13129 DIP1983 -152 5.6 GTTCGCTGCTGGCGTAC
Corynebacterium efficiens YS-314 CE2529 -175 5.5 GTTCGCTACAGGCGTAC
Corynebacterium glutamicum ATCC 13032 cg2963 -176 5.5 GTTCGCTACAGGCGTAC
Corynebacterium jeikeium K411 jk0299 -209 5.9 GTTCGCTGACGGCGTAC
Corynebacterium kroppenstedtii DSM 44385 ckrop_0337 -274 5.7 GTTCGCTCCCGGCGTAC
Corynebacterium urealyticum DSM 7109 cur_1684 -202 5.4 GTTCGCTAGGGGCGTAC
Position: -98
Score: 5.2
Sequence: GCACGCTAACAGCGAAC
Locus tag: ckrop_1372
ckrop_1372 -98 5.2 GCACGCTAACAGCGAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: clpP1
Ortholog function: Clp protease (subunit 1)
Corynebacterium amycolatum SK46 CORAM0001_0005 -107 4.5 CAACGCTTATAGCGAAC
Corynebacterium aurimucosum ATCC 700975 cauri_1890 -91 4.7 CAACGCTCATAGCGAAC
Corynebacterium diphtheriae NCTC 13129 DIP1792 -107 4.7 CGACGCTGAGAGCGAAC
Corynebacterium efficiens YS-314 CE2312 -107 4.5 AAACGCTGTTAGCGAAC
Corynebacterium glutamicum ATCC 13032 cg2645 -110 4.7 AAACGCTGATAGCGAAC
Corynebacterium jeikeium K411 jk0544 -111 5.6 GTGCGCTGACAGCGAAC
Corynebacterium kroppenstedtii DSM 44385 ckrop_1372 -98 5.2 GCACGCTAACAGCGAAC
Corynebacterium urealyticum DSM 7109 cur_1380 -102 5.1 GTGCGCTTAAAGCGAAC
© 2009-2020 RegPrecise