Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HrcA regulog to Corynebacterium kroppenstedtii DSM 44385

Reference regulog properties
Source regulog: HrcA - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: HrcA
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Phylum: Actinobacteria
Propagated regulon:
Target genome Corynebacterium kroppenstedtii DSM 44385
Orthologous TF(s) ckrop_1325
Regulated genes 1
Built upon 25 sites [see more]
Predicted regulatory interactions in Corynebacterium kroppenstedtii DSM 44385
Locus tag Position Score Sequence
Position: -152
Score: 5.2
Sequence: TTAGCACTCCCGGTGGTTGAGAGCTGG
Position: -129
Score: 5.7
Sequence: CTGGCACTCACACGGGTAGAGTGCCAA
Locus tag: ckrop_1737
ckrop_1737 -152 5.2 TTAGCACTCCCGGTGGTTGAGAGCTGG
-129 5.7 CTGGCACTCACACGGGTAGAGTGCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: groS
Ortholog function: Heat shock protein 60 family co-chaperone GroES
Corynebacterium amycolatum SK46 CORAM0001_0268 -154 6 TTAGCGCTCACTATGGTTGAGTGTTAG
-131 5.8 TTAGCACTTGCAGGGGTAGAGTGCTAA
Corynebacterium aurimucosum ATCC 700975 cauri_0474 -144 5.5 CTAGCAGTCGCGAGGGTAGAGTGCTAG
Corynebacterium diphtheriae NCTC 13129 DIP0575 -124 5.2 CTGGCACTCTCAGGGGTAGAGTGCCAG
Corynebacterium efficiens YS-314 CE0601 -134 5.3 TTAGCACCCTTAGCGGTTGAGTGCTGG
Corynebacterium glutamicum ATCC 13032 cg0690 -147 5.9 TTAGCACCCTCAACAGTTGAGTGCTGG
Corynebacterium jeikeium K411 jk1729 -145 5.7 TTAGCACTTGCGAGGGTAGAGTGCCAG
Corynebacterium kroppenstedtii DSM 44385 ckrop_1737 -152 5.2 TTAGCACTCCCGGTGGTTGAGAGCTGG
-129 5.7 CTGGCACTCACACGGGTAGAGTGCCAA
Corynebacterium urealyticum DSM 7109 cur_0393 -11 5.3 TTAGCACTTGGGTGGGTAGAGTGCTAG