Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CitT regulog to Bacillus pumilus SAFR-032

Reference regulog properties
Source regulog: CitT - Bacillales
Regulator type: Transcription factor
Regulator family: CitB
Regulation mode: activator
Biological process: Citrate utilization
Effector: Citrate
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus pumilus SAFR-032
Orthologous TF(s) BPUM_0708
Regulated genes 2
Built upon 8 sites [see more]
Predicted regulatory interactions in Bacillus pumilus SAFR-032
Locus tag Position Score Sequence
Position: -153
Score: 6.9
Sequence: TGAACAAAATGAACAAAA
Position: -144
Score: 4.1
Sequence: TGAACAAAAAGCATTTAT
Position: -8
Score: 4
Sequence: TGAACAAAGTGCTAGCAA
Locus tag: BPUM_0710
BPUM_0710 -153 6.9 TGAACAAAATGAACAAAA
-144 4.1 TGAACAAAAAGCATTTAT
-8 4 TGAACAAAGTGCTAGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: citM
Ortholog function: Mg(2+) Citrate transporter (TC 2.A.11.1.1)
Bacillus subtilis subsp. subtilis str. 168 BSU07610 -158 4.5 TGATCAAAAAGAACAAAA
Bacillus amyloliquefaciens FZB42 RBAM_007810 -154 4.7 TGAACAAAATGAACGAAA
Bacillus pumilus SAFR-032 BPUM_0710 -153 4.7 TGAACAAAATGAACAAAA
Bacillus licheniformis DSM 13 BLi00221 -158 4 TGGTCAAAAAGAACAAAA
Position: -52
Score: 4.4
Sequence: GTGATAAAAAGAGCAAAA
Locus tag: BPUM_3618
BPUM_3618 -52 4.4 GTGATAAAAAGAGCAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: citM
Ortholog function: Mg(2+) Citrate transporter (TC 2.A.11.1.1)
Bacillus halodurans C-125 BH0745 -163 4.7 TGAACAAAATAAACAAAA
Bacillus clausii KSM-K16 ABC0100 -114 4.2 TGGACAAAATAAAAAAAA
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