Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of LexA regulog to Corynebacterium jeikeium K411

Reference regulog properties
Source regulog: LexA - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Actinobacteria
Propagated regulon:
Target genome Corynebacterium jeikeium K411
Orthologous TF(s) jk1106
Regulated genes 7
Built upon 109 sites [see more]
Predicted regulatory interactions in Corynebacterium jeikeium K411
Locus tag Position Score Sequence
Position: -111
Score: 5.5
Sequence: TGGAACATGTGTTCTA
Locus tag: jk0739
jk0739 -111 5.5 TGGAACATGTGTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg2381
Ortholog function: Conserved hypothetical protein
Corynebacterium glutamicum ATCC 13032 cg2381 -122 5.1 TCAAATATGTGTTCGA
Corynebacterium efficiens YS-314 CE2064 -6 5.1 TAGAAAGTGTGTTCTA
Corynebacterium diphtheriae NCTC 13129 DIP1609 31 4.8 TCGAACAAACGTTCCA
Corynebacterium jeikeium K411 jk0739 -111 5.5 TGGAACATGTGTTCTA
Corynebacterium urealyticum DSM 7109 cur_1216 -88 5.5 TAGAACACGTGTTCGA
Corynebacterium aurimucosum ATCC 700975 cauri_1681 -145 4.7 TCGAACACCTGCTCTA
Corynebacterium kroppenstedtii DSM 44385 ckrop_0735 -179 4.9 TCGAATATAAGTTCGA
Position: -30
Score: 4.7
Sequence: TAAAACACGTGTGCTA
Locus tag: jk1056
jk1056 -30 4.7 TAAAACACGTGTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ruvC
Ortholog function: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Corynebacterium glutamicum ATCC 13032 cg1871 -104 4.2 TCGCAATTGTGTGCTA
Corynebacterium efficiens YS-314 CE1775 -37 4.1 TCGCAATTATGTGCTA
Corynebacterium diphtheriae NCTC 13129 DIP1377 -123 4.1 TCGCAATTATGTGCTA
Corynebacterium jeikeium K411 jk1056 -30 4.7 TAAAACACGTGTGCTA
Corynebacterium urealyticum DSM 7109 cur_0934 -52 5.2 TCGATCATGTGTGCTA
Corynebacterium aurimucosum ATCC 700975 cauri_1419 -10 4.4 TAGAACACATGTGTGT
Corynebacterium amycolatum SK46 CORAM0001_2122 -63 4.1 ACAAACAGCTGTTCGA
Position: -164
Score: 5
Sequence: TAGATCACGTGTTCTA
Position: -126
Score: 4.4
Sequence: TAGCACGCTTGTTCGA
Position: -84
Score: 4.6
Sequence: TCGAACACATATACTA
Locus tag: jk1106
jk1106 -164 5 TAGATCACGTGTTCTA
-126 4.4 TAGCACGCTTGTTCGA
-84 4.6 TCGAACACATATACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lexA
Ortholog function: SOS-response repressor LexA
Corynebacterium glutamicum ATCC 13032 cg2114 -270 4.1 CCGTTCACATGTTCGA
-190 4.4 TCGAACACTCGTACCA
Corynebacterium efficiens YS-314 CE1823 -209 4.7 TCGTTCACATGTTCGA
-130 4.4 TCGAACACTCGTACCA
Corynebacterium diphtheriae NCTC 13129 DIP1426 -268 4.9 TCGACAACATGTTCGA
Corynebacterium jeikeium K411 jk1106 -164 5 TAGATCACGTGTTCTA
-126 4.4 TAGCACGCTTGTTCGA
-84 4.6 TCGAACACATATACTA
Corynebacterium urealyticum DSM 7109 cur_0884 -103 5.4 TCGAACGGGTGTTCTA
-68 4.3 TAGCACGCACGTTCGA
Corynebacterium aurimucosum ATCC 700975 cauri_1477 -204 4.2 TCGACCAACCGTTCGA
-124 4.2 TCGAACATTTTTTCCT
Corynebacterium amycolatum SK46 CORAM0001_0857 -227 4.4 TCAAACGACTGTTCGA
Corynebacterium kroppenstedtii DSM 44385 ckrop_1088 -213 4 TCGAACATGTGCGATC
Position: -175
Score: 4.6
Sequence: TCGAACAAAGGTTCGT
Locus tag: jk1116
jk1116 -175 4.6 TCGAACAAAGGTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: recA
Ortholog function: Recombination protein RecA
Corynebacterium glutamicum ATCC 13032 cg2141 -240 5 TCGAACAGTTGTGCGT
Corynebacterium efficiens YS-314 CE1849 -213 5 TCGAACAGTTGTGCGT
Corynebacterium diphtheriae NCTC 13129 DIP1450 -204 4.9 TCGAACATGTATTCGT
Corynebacterium jeikeium K411 jk1116 -175 4.6 TCGAACAAAGGTTCGT
Corynebacterium urealyticum DSM 7109 cur_0874 -307 4.6 TCGAACAAAGGTTCGT
Corynebacterium aurimucosum ATCC 700975 cauri_1500 -211 4.5 TCGAACACTTGTGTGT
Corynebacterium amycolatum SK46 CORAM0001_0838 -140 4 TCGAACAGGGTTTCGC
Corynebacterium kroppenstedtii DSM 44385 ckrop_1113 -245 4.5 TCGAACATACGTTTGC
Position: -8
Score: 5.2
Sequence: TAGAATATGTGTTCTA
Locus tag: jk1709
jk1709 -8 5.2 TAGAATATGTGTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dnaE2
Ortholog function: Error-prone DNA polymerase
Corynebacterium glutamicum ATCC 13032 cg0738 -19 5.1 TGGAAAATTTGTTCTA
Corynebacterium efficiens YS-314 CE0632 -26 4.7 TGGAAAGAATGTTCTA
Corynebacterium diphtheriae NCTC 13129 DIP0612 -32 4.2 GTGAACATGTGTGTGA
Corynebacterium jeikeium K411 jk1709 -8 5.2 TAGAATATGTGTTCTA
Corynebacterium urealyticum DSM 7109 cur_0412 -36 5.4 TCGAATAGATGTTCGA
Corynebacterium aurimucosum ATCC 700975 cauri_0500 -33 5.2 TGGAATACATGTTCGA
Corynebacterium amycolatum SK46 CORAM0001_0285 -49 4.8 TCGAAAATACGTTTGA
Corynebacterium kroppenstedtii DSM 44385 ckrop_0333 -191 5 TCGAACACGCGTACTA
Position: -99
Score: 5.4
Sequence: TAGAACACGTGTTCTA
Locus tag: jk1717
jk1717 -99 5.4 TAGAACACGTGTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg0713
Ortholog function: Conserved hypothetical protein
Corynebacterium glutamicum ATCC 13032 cg0713 -40 5.5 TGGAACAGGTGTTCGA
Corynebacterium efficiens YS-314 CE0627 5 5.4 TGGAACACATGTTCTA
Corynebacterium jeikeium K411 jk1717 -99 5.4 TAGAACACGTGTTCTA
Corynebacterium urealyticum DSM 7109 cur_0403 -165 5.1 TAGAACACCTGTTCGA
Corynebacterium aurimucosum ATCC 700975 cauri_0492 -16 4.8 TCAAACAGGTGTTCGT
Corynebacterium amycolatum SK46 CORAM0001_0278 -89 5 TCGAACGTACGTGCTA
Position: -125
Score: 4.7
Sequence: TAGAGCATATGTTCTA
Locus tag: jk1858
jk1858 -125 4.7 TAGAGCATATGTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: modC
Ortholog function: Modification methylase NgoMIV (EC 2.1.1.37)
Corynebacterium jeikeium K411 jk1858 -125 4.7 TAGAGCATATGTTCTA
Corynebacterium amycolatum SK46 CORAM0001_0615 -101 5.2 TCGAATGGATGTTCGA
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