Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of GabR regulog to Corynebacterium aurimucosum ATCC 700975

Reference regulog properties
Source regulog: GabR - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode:
Biological process: Gamma-aminobutyrate utilization
Effector:
Phylum: Actinobacteria
Propagated regulon:
Target genome Corynebacterium aurimucosum ATCC 700975
Orthologous TF(s) cauri_0645, cauri_0644
Regulated genes 5
Built upon 9 sites [see more]
Predicted regulatory interactions in Corynebacterium aurimucosum ATCC 700975
Locus tag Position Score Sequence
Position: -207
Score: 5.2
Sequence: ATCGTGCAGAATTTCTATCCCCA
Position: -113
Score: 5.5
Sequence: ATTGTGGACAATTTCTCACCATT
Locus tag: cauri_0643
cauri_0643 -207 5.2 ATCGTGCAGAATTTCTATCCCCA
-113 5.5 ATTGTGGACAATTTCTCACCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gabT2
Ortholog function: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Corynebacterium aurimucosum ATCC 700975 cauri_0646 -96 5.4 TAGGTGCAAAATTTATACACCCT
Corynebacterium aurimucosum ATCC 700975 cauri_0643 -207 5.2 ATCGTGCAGAATTTCTATCCCCA
-113 5.5 ATTGTGGACAATTTCTCACCATT
Corynebacterium glutamicum ATCC 13032 cg0566 -113 4.9 ATGGGCGAAATATTGTCTACAAC
Position: -138
Score: 5.5
Sequence: AATGGTGAGAAATTGTCCACAAT
Position: -44
Score: 5.2
Sequence: TGGGGATAGAAATTCTGCACGAT
Locus tag: cauri_0644
cauri_0644 -138 5.5 AATGGTGAGAAATTGTCCACAAT
-44 5.2 TGGGGATAGAAATTCTGCACGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gabR
Ortholog function: Predicted transcriptional regulator of gamma-aminobutyrate utilization, COG2508 family
Corynebacterium aurimucosum ATCC 700975 cauri_0644 -138 5.5 AATGGTGAGAAATTGTCCACAAT
-44 5.2 TGGGGATAGAAATTCTGCACGAT
Corynebacterium aurimucosum ATCC 700975 cauri_0645 -44 5.4 AGGGTGTATAAATTTTGCACCTA
Corynebacterium glutamicum ATCC 13032 cg0565 -50 4.9 GTTGTAGACAATATTTCGCCCAT
Position: -44
Score: 5.4
Sequence: AGGGTGTATAAATTTTGCACCTA
Locus tag: cauri_0645
cauri_0645 -44 5.4 AGGGTGTATAAATTTTGCACCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gabR
Ortholog function: Predicted transcriptional regulator of gamma-aminobutyrate utilization, COG2508 family
Corynebacterium aurimucosum ATCC 700975 cauri_0644 -138 5.5 AATGGTGAGAAATTGTCCACAAT
-44 5.2 TGGGGATAGAAATTCTGCACGAT
Corynebacterium aurimucosum ATCC 700975 cauri_0645 -44 5.4 AGGGTGTATAAATTTTGCACCTA
Corynebacterium glutamicum ATCC 13032 cg0565 -50 4.9 GTTGTAGACAATATTTCGCCCAT
Position: -96
Score: 5.4
Sequence: TAGGTGCAAAATTTATACACCCT
Locus tag: cauri_0646
cauri_0646 -96 5.4 TAGGTGCAAAATTTATACACCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gabT2
Ortholog function: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Corynebacterium aurimucosum ATCC 700975 cauri_0646 -96 5.4 TAGGTGCAAAATTTATACACCCT
Corynebacterium aurimucosum ATCC 700975 cauri_0643 -207 5.2 ATCGTGCAGAATTTCTATCCCCA
-113 5.5 ATTGTGGACAATTTCTCACCATT
Corynebacterium glutamicum ATCC 13032 cg0566 -113 4.9 ATGGGCGAAATATTGTCTACAAC
Position: -45
Score: 4
Sequence: ATGGGGTGCAACCCATACACACT
Locus tag: cauri_0649
cauri_0649 -45 4 ATGGGGTGCAACCCATACACACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gabD1
Ortholog function: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
Corynebacterium aurimucosum ATCC 700975 cauri_0649 -45 4 ATGGGGTGCAACCCATACACACT
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