Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of DVUA0143 regulog to Desulfovibrio magneticus RS-1

Reference regulog properties
Source regulog: DVUA0143 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Nitrogen fixation
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio magneticus RS-1
Orthologous TF(s) DMR_26510
Regulated genes 2
Built upon 22 sites [see more]
Predicted regulatory interactions in Desulfovibrio magneticus RS-1
Locus tag Position Score Sequence
Position: -148
Score: 4.8
Sequence: CTACAATTCTGTCG
Position: -125
Score: 4.7
Sequence: CGACAAATTTGTTT
Locus tag: DMR_17520
DMR_17520 -148 4.8 CTACAATTCTGTCG
-125 4.7 CGACAAATTTGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifE
Ortholog function: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
Desulfovibrio vulgaris Hildenborough DVUA0009 -435 4.8 CTACAAAAATGTAG
Desulfovibrio vulgaris str. Miyazaki F DvMF_2620 -230 4.2 CAACGCATTTGTCG
-212 4.6 CGACAAAATGGTCG
Desulfovibrio salexigens DSM 2638 Desal_0439 -200 4.1 CTGCAAAAATGTAG
-182 5 CTACAATTTTGTAC
Desulfovibrio magneticus RS-1 DMR_17520 -148 4.8 CTACAATTCTGTCG
-125 4.7 CGACAAATTTGTTT
Desulfomicrobium baculatum DSM 4028 Dbac_0841 -184 5.3 CTACATTTTTGTCT
Position: -204
Score: 5.1
Sequence: CGACATTTATGTCG
Locus tag: DMR_20560
DMR_20560 -204 5.1 CGACATTTATGTCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifH
Ortholog function: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
Desulfovibrio vulgaris Hildenborough DVUA0015 -435 4.8 CTACAAAAATGTAG
Desulfovibrio vulgaris str. Miyazaki F DvMF_2613 -230 4.2 CAACGCATTTGTCG
-212 4.6 CGACAAAATGGTCG
Desulfovibrio salexigens DSM 2638 Desal_0447 -200 4.1 CTGCAAAAATGTAG
-182 5 CTACAATTTTGTAC
Desulfovibrio magneticus RS-1 DMR_20560 -204 5.1 CGACATTTATGTCG
-191 4.4 GAACATTTTTGTCG
-168 4.2 CAACAAAAATGTTT
Desulfomicrobium baculatum DSM 4028 Dbac_0834 -184 5.3 CTACATTTTTGTCT