Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of DVU0539/DVU0946 regulog to Desulfovibrio magneticus RS-1

Reference regulog properties
Source regulog: DVU0539/DVU0946 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio magneticus RS-1
Orthologous TF(s) DMR_33180
Regulated genes 3
Built upon 30 sites [see more]
Predicted regulatory interactions in Desulfovibrio magneticus RS-1
Locus tag Position Score Sequence
Position: -212
Score: 4.5
Sequence: TGACAACTCCAGTTTACA
Locus tag: DMR_25930
DMR_25930 -212 4.5 TGACAACTCCAGTTTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0943
Ortholog function: Uncharacterized membrane protein family UPF0324
Desulfohalobium retbaense DSM 5692 Dret_0966 -399 5 TGTAAACGCGAGTTGGCA
Desulfovibrio magneticus RS-1 DMR_25930 -212 4.5 TGACAACTCCAGTTTACA
Desulfovibrio vulgaris str. Miyazaki F DvMF_2092 -238 4.4 TGCCTTTTCGAGTTGGCA
Position: -129
Score: 5.4
Sequence: TGCTAACTGGAGTTTGCG
Locus tag: DMR_33160
DMR_33160 -129 5.4 TGCTAACTGGAGTTTGCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0542
Ortholog function: putative universal stress protein
Desulfovibrio magneticus RS-1 DMR_33160 -129 5.4 TGCTAACTGGAGTTTGCG
Desulfovibrio vulgaris Hildenborough DVU0542 -149 5.4 TGCTAACACGAGTTAGCA
Position: -39
Score: 5.1
Sequence: CGCAAACTCCAGTTAGCA
Locus tag: DMR_33170
DMR_33170 -39 5.1 CGCAAACTCCAGTTAGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0540
Ortholog function: integral membrane sensor signal transduction histidine kinase
Desulfohalobium retbaense DSM 5692 Dret_1221 -484 5.2 TGCCAACCGCGGTTGGCA
-460 4.7 TGCTAAGCCGGGATTGCA
-351 4.3 TGCCAATCGCGCTTAGCA
Desulfovibrio magneticus RS-1 DMR_33170 -39 5.1 CGCAAACTCCAGTTAGCA